RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 PHF3Q92576 2039 aaKnown RBP18.75■□□□□ 0.59
UPF3A-202ENST00000375299 C5orf52A6NGY3 159 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 C9JQL5 133 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 AGPAT2O15120 278 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 SGCEO43556 437 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 DAP3P51398 398 aaKnown RBP18.74■□□□□ 0.59
UPF3A-202ENST00000375299 S100A10P60903 97 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 FOXK1P85037 733 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 SMCO1Q147U7 214 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 C5orf46Q6UWT4 87 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 Q7L0L9 218 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 LHFPL1Q86WI0 220 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 SPACA5Q96QH8 159 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 OR5B2Q96R09 309 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 LINC00587B1AMM8 73 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 RAD51DO75771 328 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 ZNF20P17024 532 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 BCKDHBP21953 392 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 DVL1P1P54792 670 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-202ENST00000375299 ZP4Q12836 540 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 SHHQ15465 462 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 SLC16A13Q7RTY0 426 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 OR13G1Q8NGZ3 307 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 OR6S1Q8NH40 331 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 KIRREL1Q96J84 757 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 CLCC1Q96S66 551 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 CACFD1Q9UGQ2 172 aa18.74■□□□□ 0.59
UPF3A-202ENST00000375299 PRAMEF26H0Y7S4 382 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 UBE2CO00762 179 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 TO15178 435 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 CDC14BO60729 498 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 S100A9P06702 114 aaKnown RBP18.73■□□□□ 0.59
UPF3A-202ENST00000375299 HKR1P10072 659 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 ETV3LQ6ZN32 361 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 OR10H5Q8NGA6 315 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 C11orf40Q8WZ69 217 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 HIST1H2BAQ96A08 127 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 C1orf147Q96MC9 270 aaPredicted RBP18.73■□□□□ 0.59
UPF3A-202ENST00000375299 OCSTAMPQ9BR26 566 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 NKX2-4Q9H2Z4 354 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 SOHLH2Q9NX45 425 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 IGKV3D-11A0A0A0MRZ8 115 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 ADH6P28332 368 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 CAPZBP47756 277 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 TMEM50BP56557 158 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 MRPS21P82921 87 aaKnown RBP18.73■□□□□ 0.59
UPF3A-202ENST00000375299 AKIRIN2Q53H80 203 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 TMEM268Q5VZI3 342 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 RBMS3Q6XE24 437 aaKnown RBP18.73■□□□□ 0.59
UPF3A-202ENST00000375299 ZNF251Q9BRH9 671 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 GSKIPQ9P0R6 139 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 CLEC1BQ9P126 229 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 OSGIN2Q9Y236 505 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 MEMO1Q9Y316 297 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 TIMM10BQ9Y5J6 103 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 KPTNQ9Y664 436 aa18.73■□□□□ 0.59
UPF3A-202ENST00000375299 THADAQ6YHU6 1953 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 TCRBV21S2A2A0A5A6 115 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 ZNF354AO60765 605 aaPredicted RBP18.72■□□□□ 0.59
UPF3A-202ENST00000375299 FABP1P07148 127 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 CPT2P23786 658 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 P2RY4P51582 365 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 FZD2Q14332 565 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 RNF212Q495C1 297 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 AADACL3Q5VUY0 350 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 Q6ZRG5 221 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 KCNG3Q8TAE7 436 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 MRPL38Q96DV4 380 aaKnown RBP18.72■□□□□ 0.59
UPF3A-202ENST00000375299 TMEM59Q9BXS4 323 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 BANF2Q9H503 90 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 MYO9BQ13459 2157 aa18.72■□□□□ 0.59
UPF3A-202ENST00000375299 SPTY2D1-AS1A0A0U1RR47 76 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 SEMA4FO95754 770 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 CST4P01036 141 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 S100A6P06703 90 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 HOXB5P09067 269 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 ZNF806P0C7X5 589 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 RPS2P15880 293 aaKnown RBP18.71■□□□□ 0.59
UPF3A-202ENST00000375299 AMY2BP19961 511 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 DRD1P21728 446 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 OR3A4PP47883 348 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 EIF2S3LQ2VIR3 472 aaKnown RBP18.71■□□□□ 0.59
UPF3A-202ENST00000375299 OR5AS1Q8N127 324 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 OR10S1Q8NGN2 331 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 CYYR1Q96J86 154 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 AKR1E2Q96JD6 320 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 WWTR1Q9GZV5 400 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 MED29Q9NX70 200 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 PLA2G2EQ9NZK7 142 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 PIAS3Q9Y6X2 628 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 ZNF44P15621 663 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 CBR1P16152 277 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 GABRG2P18507 467 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 OR1D4P47884 311 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 POU3F1Q03052 451 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-202ENST00000375299 HGFACQ04756 655 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 DLX2Q07687 328 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-202ENST00000375299 OR51E1Q8TCB6 317 aa18.71■□□□□ 0.59
UPF3A-202ENST00000375299 HTR3BO95264 441 aa18.7■□□□□ 0.58
UPF3A-202ENST00000375299 ID4P47928 161 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms