RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 LINC00052Q96N35 136 aa7.96□□□□□ -1.14
UBR4-201ENST00000375218 FTSJ1Q9UET6 329 aa7.96□□□□□ -1.14
UBR4-201ENST00000375218 FBXO7Q9Y3I1 522 aa7.96□□□□□ -1.14
UBR4-201ENST00000375218 RFNGQ9Y644 331 aa7.96□□□□□ -1.14
UBR4-201ENST00000375218 PLXNA2O75051 1894 aa7.96□□□□□ -1.14
UBR4-201ENST00000375218 MAP1LC3B2A6NCE7 125 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 TAC1P20366 129 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 KDELR1P24390 212 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 RORCP51449 518 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 GNA12Q03113 381 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 GAGE5Q13069 117 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 GAGE6Q13070 117 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 TAL2Q16559 108 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 FAM74A1Q5RGS3 127 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 UBAC2Q8NBM4 344 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 ADTRPQ96IZ2 230 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 RIOK2Q9BVS4 552 aaKnown RBP7.95□□□□□ -1.14
UBR4-201ENST00000375218 MAP1LC3BQ9GZQ8 125 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 RBM38Q9H0Z9 239 aaKnown RBP7.95□□□□□ -1.14
UBR4-201ENST00000375218 CALML5Q9NZT1 146 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 TBX21Q9UL17 535 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 NBEAQ8NFP9 2946 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 TMEM218A2RU14 115 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 TFAP2AP05549 437 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 IL7P13232 177 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 REG1BP48304 166 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 DEFB103AP81534 67 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 FAM74A3Q4VXF1 159 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 HECTD2Q5U5R9 776 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 SEM1Q6ZVN7 128 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 TMEFF1Q8IYR6 380 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 B3GALNT2Q8NCR0 500 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 C8orf44Q96CB5 159 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 GRAMD2BQ96HH9 432 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 FBLN5Q9UBX5 448 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 LSM5Q9Y4Y9 91 aaKnown RBP7.95□□□□□ -1.14
UBR4-201ENST00000375218 MGAQ8IWI9 3026 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 PIGPP57054 158 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 CEACAM21Q3KPI0 293 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 DCST2Q5T1A1 773 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 GALNT10Q86SR1 603 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 LDLRAD3Q86YD5 345 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 TMEM151AQ8N4L1 468 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 RTP4Q96DX8 246 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 JSRP1Q96MG2 331 aaPredicted RBP7.95□□□□□ -1.14
UBR4-201ENST00000375218 C20orf27Q9GZN8 174 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 ZFP30Q9Y2G7 519 aa7.95□□□□□ -1.14
UBR4-201ENST00000375218 E9PLN8 166 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 HMGB3O15347 200 aaKnown RBP7.94□□□□□ -1.14
UBR4-201ENST00000375218 CTSCP53634 463 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 GAB1Q13480 694 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 ANKRD54Q6NXT1 300 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 ANKRD33Q7Z3H0 272 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 PIGZQ86VD9 579 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 C8orf31Q8N9H6 132 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 CTHRC1Q96CG8 243 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 SMIM19Q96E16 107 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 GFM1Q96RP9 751 aaKnown RBP7.94□□□□□ -1.14
UBR4-201ENST00000375218 TP53RKQ96S44 253 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 VKORC1Q9BQB6 163 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 MESP1Q9BRJ9 268 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 DCSTAMPQ9H295 470 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 FNDC4Q9H6D8 234 aaPredicted RBP7.94□□□□□ -1.14
UBR4-201ENST00000375218 IL36GQ9NZH8 169 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 NPAP1Q9NZP6 1156 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 ESDP10768 282 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 ZNF35P13682 527 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 SLC2A5P22732 501 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 TAS2R43P59537 309 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 S100A10P60903 97 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 C3AR1Q16581 482 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 TMPRSS11BQ86T26 416 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 PTX4Q96A99 478 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 PRRG4Q9BZD6 226 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 SYT4Q9H2B2 425 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 B4GALT7Q9UBV7 327 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 PKIGQ9Y2B9 76 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 CXorf49A8MYA2 514 aaPredicted RBP7.94□□□□□ -1.14
UBR4-201ENST00000375218 B5MCH6 92 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 CCL25O15444 150 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 AVPR1BP47901 424 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 DEFA3P59666 94 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 DEFA5Q01523 94 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 TTLL9Q3SXZ7 439 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 CCSMST1Q4G0I0 132 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 TMEM42Q69YG0 159 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 LAIR1Q6GTX8 287 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 MFSD12Q6NUT3 480 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 PAMR1Q6UXH9 720 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 IFNEQ86WN2 208 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 OR8I2Q8N0Y5 310 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 MDS2Q8NDY4 140 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 RXFP2Q8WXD0 754 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 RAB39BQ96DA2 213 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 UHRF2Q96PU4 802 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 SNRNP25Q9BV90 132 aaKnown RBP7.94□□□□□ -1.14
UBR4-201ENST00000375218 DCTN6O00399 190 aa7.94□□□□□ -1.14
UBR4-201ENST00000375218 LSM8O95777 96 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms