RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 CENPVL3A0A0U1RRI6 287 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 TCRBV7S3A2A0A539 114 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 MYADML2A6NDP7 307 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 CLDN34H7C241 214 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 SAP18O00422 153 aaKnown RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 TNFRSF10CO14798 259 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 HPRT1P00492 218 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 THY1P04216 161 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 C4BPBP20851 252 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 SDHBP21912 280 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 NBL1P41271 181 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 PAFAH1B2P68402 229 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 CRYZQ08257 329 aaKnown RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 SLC25A52Q3SY17 297 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 AWAT2Q6E213 333 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 CHSY1Q86X52 802 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 OR52I1Q8NGK6 324 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 OR6T1Q8NGN1 323 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 WNT2BQ93097 391 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 ZDHHC16Q969W1 377 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 ZG16BQ96DA0 208 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 LMLNQ96KR4 655 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 OR7D2Q96RA2 312 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 MYADMQ96S97 322 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 OR51I2Q9H344 312 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 AURKAIP1Q9NWT8 199 aaPredicted RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 ANKRD10Q9NXR5 420 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 TRAV39A0A0B4J263 110 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 AGPAT2O15120 278 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 NDUFS4O43181 175 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 PRAMEF10O60809 474 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 GABARAPO95166 117 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 ORM1P02763 201 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 OR5G3P0C626 314 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 RPA3P35244 121 aaPredicted RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 PBX2P40425 430 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 AMTP48728 403 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 ZNF133P52736 654 aaPredicted RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 SLC25A3Q00325 362 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 PSG6Q00889 435 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 TLE1Q04724 770 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 TRAF3Q13114 568 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 OR2F1Q13607 317 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 DCST2Q5T1A1 773 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 ADAMTSL4Q6UY14 1074 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 ZNF761Q86XN6 746 aaPredicted RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 MUC20Q8N307 709 aaPredicted RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 RDH11Q8TC12 318 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 Q8WTZ3 238 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 OR5P2Q8WZ92 322 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 RNF183Q96D59 192 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 NAA38Q9BRA0 125 aaKnown RBP7.02□□□□□ -1.29
USP48-203ENST00000374732 CXCL16Q9H2A7 254 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 GP6Q9HCN6 339 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 DOK5Q9P104 306 aa7.02□□□□□ -1.29
USP48-203ENST00000374732 TCRBV9S1A1TA0A576 114 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 NFATC1O95644 943 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 HLA-HP01893 362 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 C1QAP02745 245 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 CELA3BP08861 270 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 AK4P27144 223 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 AVPR1BP47901 424 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 LILRA4P59901 499 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 MEF2DQ14814 521 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 OPCMLQ14982 345 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 EBPQ15125 230 aaKnown RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 CDO1Q16878 200 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 GGTA1PQ4G0N0 100 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 XAF1Q6GPH4 301 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 LAIR1Q6GTX8 287 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 PRSS48Q7RTY5 328 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 SLC36A1Q7Z2H8 476 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 MFSD6LQ8IWD5 586 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 KLHDC8AQ8IYD2 350 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 TMEM86AQ8N2M4 240 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 KREMEN2Q8NCW0 462 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 HAVCR2Q8TDQ0 301 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 TFAP2CQ92754 450 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 TMPRSS13Q9BYE2 586 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 CXorf36Q9H7Y0 433 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 ACSS2Q9NR19 701 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 B4GALT7Q9UBV7 327 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 TSC2P49815 1807 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 COL4A4P53420 1690 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 PSMB11A5LHX3 300 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 B4DGG1 531 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 F5H5K5 113 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 GRAP2O75791 330 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 FARS2O95363 451 aaKnown RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 FBLP22087 321 aaKnown RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 HTR2AP28223 471 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 FGF9P31371 208 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 OR3A4PP47883 348 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 CCL11P51671 97 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 ST3GAL3Q11203 375 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 MAD2L1BPQ15013 274 aaPredicted RBP7.01□□□□□ -1.29
USP48-203ENST00000374732 LRRC75BQ2VPJ9 315 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 HLA-BQ31612 363 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 RAB6CQ53S08 254 aa7.01□□□□□ -1.29
USP48-203ENST00000374732 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms