RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 S100A16Q96FQ6 103 aaKnown RBP12.61□□□□□ -0.39
HMGA1-203ENST00000374116 SEC22CQ9BRL7 303 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 ELOVL3Q9HB03 270 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
HMGA1-203ENST00000374116 MRPL22Q9NWU5 206 aaKnown RBP12.61□□□□□ -0.39
HMGA1-203ENST00000374116 MLXQ9UH92 298 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 A0A1B0GTH9 108 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 NPIPB13A6NJU9 1138 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 NPIPB4C9JG80 1138 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 EFNA2O43921 213 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 PSMB1P20618 241 aaKnown RBP12.6□□□□□ -0.39
HMGA1-203ENST00000374116 AKR1D1P51857 326 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 TDGF1P3P51864 188 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MEP1BQ16820 701 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 UQCC3Q6UW78 93 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ALKAL2Q6UX46 152 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 GSG1LQ6UXU4 331 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 H1FNTQ75WM6 255 aaPredicted RBP12.6□□□□□ -0.39
HMGA1-203ENST00000374116 OR6K3Q8NGY3 331 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 C15orf40Q8WUR7 153 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 DDIT4LQ96D03 193 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ARL5BQ96KC2 179 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MRGPRX4Q96LA9 322 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 AMELYQ99218 206 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 EXO5Q9H790 373 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ZDHHC11Q9H8X9 412 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 B4GALT7Q9UBV7 327 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 OR5V1Q9UGF6 321 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF462Q96JM2 2506 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 GTF3C1Q12789 2109 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MS4A18H0YCH9 400 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ECDO95905 644 aaPredicted RBP12.6□□□□□ -0.39
HMGA1-203ENST00000374116 SPARCP09486 303 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 SMIM6P0DI80 62 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 CTLA4P16410 223 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ADRA2CP18825 462 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 IL11P20809 199 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 KIR3DL2P43630 455 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 STARP49675 285 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 DAP3P51398 398 aaKnown RBP12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ART1P52961 327 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ADAM8P78325 824 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
HMGA1-203ENST00000374116 GLO1Q04760 184 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 FOXF1Q12946 379 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MRPL49Q13405 166 aaKnown RBP12.6□□□□□ -0.39
HMGA1-203ENST00000374116 C3AR1Q16581 482 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 HYAL4Q2M3T9 481 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 PLPPR5Q32ZL2 321 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MS4A18Q3C1V0 323 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 OLFML2AQ68BL7 652 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF626Q68DY1 528 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
HMGA1-203ENST00000374116 DNM1P34Q6PK57 102 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 PGAP1Q75T13 922 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 POC1BQ8TC44 478 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MCHR2Q969V1 340 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 MIB2Q96AX9 1013 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 POTEKPQ9BYX7 375 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 PTGES2Q9H7Z7 377 aa12.6□□□□□ -0.39
HMGA1-203ENST00000374116 GABARAPH6UMI1 98 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 MT-ND4P03905 459 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 ANXA2P07355 339 aaKnown RBP12.59□□□□□ -0.39
HMGA1-203ENST00000374116 CFPP27918 469 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 GDNFP39905 211 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 MNDAP41218 407 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 DSCR4P56555 118 aaPredicted RBP12.59□□□□□ -0.39
HMGA1-203ENST00000374116 MELKQ14680 651 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 RNASE12Q5GAN4 147 aaKnown RBP12.59□□□□□ -0.39
HMGA1-203ENST00000374116 RAET1LQ5VY80 246 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 LINGO2Q7L985 606 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 PRSS45Q7RTY3 260 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 KRT77Q7Z794 578 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 PXT1Q8NFP0 134 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 SYNPRQ8TBG9 265 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 ASB10Q8WXI3 467 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 TMEM106AQ96A25 262 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 DMRTA2Q96SC8 542 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 TMEM185BQ9H7F4 350 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 GPN1Q9HCN4 374 aaPredicted RBP12.59□□□□□ -0.39
HMGA1-203ENST00000374116 KLHL9Q9P2J3 617 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 SPRR3Q9UBC9 169 aa12.59□□□□□ -0.39
HMGA1-203ENST00000374116 FASNP49327 2511 aaKnown RBP12.59□□□□□ -0.39
HMGA1-203ENST00000374116 TRGV5A0A0B4J1U4 118 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 TMEM82A0PJX8 343 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 NPIPA2E9PIF3 369 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 NPIPA3F8WFD2 350 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 HPNP05981 417 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 SRD5A2P31213 254 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 UQCRFS1P47985 274 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 ZNF41P51814 821 aaPredicted RBP12.58□□□□□ -0.4
HMGA1-203ENST00000374116 CLDN12P56749 244 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 AP3S2P59780 193 aa12.58□□□□□ -0.4
HMGA1-203ENST00000374116 EIF2B1Q14232 305 aaKnown RBP12.58□□□□□ -0.4
HMGA1-203ENST00000374116 OR7A5Q15622 319 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms