RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SP1P08047 785 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 HCKP08631 526 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DUX4L2P0CJ85 424 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DUX4L3P0CJ86 424 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DUX4L4P0CJ87 422 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DUX4L5P0CJ88 424 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DUX4L6P0CJ89 424 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DUX4L7P0CJ90 424 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF708P17019 499 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 NME2P22392 152 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 CRYGSP22914 178 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DNASE1P24855 282 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 EIF2S3P41091 472 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 PTGFRP43088 359 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 CCR6P51684 374 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 FUT6P51993 359 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SRSF4Q08170 494 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SPOCK1Q08629 439 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 Q0VFX4 171 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 FCN2Q15485 313 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 TRIP6Q15654 476 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 GRK1Q15835 563 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 CARTPTQ16568 116 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SRSF7Q16629 238 aaKnown RBP eCLIP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ST3GAL2Q16842 350 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ODF4Q2M2E3 257 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 LINC00303Q3SY05 128 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 CDNFQ49AH0 187 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SFRP4Q6FHJ7 346 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 CORO6Q6QEF8 472 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ASCL4Q6XD76 172 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 C3P1Q6ZMU1 363 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 Q6ZTK2 550 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SLC36A1Q7Z2H8 476 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 COMMD2Q86X83 199 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SULF2Q8IWU5 870 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 IZUMO1Q8IYV9 350 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SAXO1Q8IYX7 474 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF101Q8IZC7 436 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ZFP62Q8NB50 900 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 PXT1Q8NFP0 134 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 OR51A2Q8NGJ7 313 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 OR4C16Q8NGL9 310 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 OR10D3Q8NH80 312 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 NANOS1Q8WY41 292 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 PIGTQ969N2 578 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SPSB4Q96A44 273 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DACT3Q96B18 629 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 RAB3CQ96E17 227 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF385AQ96PM9 386 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 GPER1Q99527 375 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 FOXB1Q99853 325 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM59Q9BXS4 323 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM185BQ9H7F4 350 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF703Q9H7S9 590 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 IFT46Q9NQC8 304 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 B3GNT2Q9NY97 397 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 DUX4Q9UBX2 424 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SLC7A11Q9UPY5 501 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 NOP16Q9Y3C1 178 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A1B0GVC2 190 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM82A0PJX8 343 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 A6NIN4 97 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF814B7Z6K7 855 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 SHISA8B8ZZ34 492 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF587BE7ETH6 402 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 H0YC42 278 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 ARPC1BO15143 372 aaKnown RBP7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 GMDSO60547 372 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 TECTAO75443 2155 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 TRAPPC6AO75865 159 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 TPOP07202 933 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 ADRB1P08588 477 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 VSIG8P0DPA2 414 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 VEGFCP49767 419 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 RBP2P50120 134 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 GNG2P59768 71 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 RPS27AP62979 156 aaKnown RBP7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 GUCA2AQ02747 115 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 SLC10A1Q14973 349 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 OR1C1Q15619 314 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 KISS1Q15726 138 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 INPP5JQ15735 1006 aaPredicted RBP7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 CARD17Q5XLA6 110 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM65Q6PI78 240 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 GLIPR1L1Q6UWM5 242 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 UNQ6126/PRO20091Q6UXV3 157 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM57BQ71RH2 274 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 DTX1Q86Y01 620 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 COL27A1Q8IZC6 1860 aaPredicted RBP7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 CSNK2A3Q8NEV1 391 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 OR52N4Q8NGI2 321 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 OR4D6Q8NGJ1 314 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 OR13C9Q8NGT0 318 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 ADAT3Q96EY9 351 aaPredicted RBP7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 BOD1Q96IK1 185 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 GPR137Q96N19 417 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 GAL3ST1Q99999 423 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 CRLF2Q9HC73 371 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms