RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ACTG1P63261 375 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 DMRTC1Q5HYR2 192 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 GLIPR1L1Q6UWM5 242 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 OR11H7Q8NGC8 314 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 CMBLQ96DG6 245 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 DEFB127Q9H1M4 99 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 NOX3Q9HBY0 568 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 PARPBPQ9NWS1 579 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 ZNF224Q9NZL3 707 aa17.12■□□□□ 0.33
HDAC1-201ENST00000373548 TMEM235A6NFC5 223 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 PRF1P14222 555 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 HTR5AP47898 357 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 PCBD1P61457 104 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 MAB21L1Q13394 359 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 CD276Q5ZPR3 534 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 CRIP3Q6Q6R5 217 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 IGF2-ASQ6U949 168 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 CDH24Q86UP0 819 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 ZNF101Q8IZC7 436 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 AQP3Q92482 292 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 PRRG4Q9BZD6 226 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 BCO1Q9HAY6 547 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 PIGLQ9Y2B2 252 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 ZNF724A8MTY0 619 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 CD3DP04234 171 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 MMP7P09237 267 aaPredicted RBP17.11■□□□□ 0.33
HDAC1-201ENST00000373548 AKAIN1P0CW23 69 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 TNFSF10P50591 281 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 MRPS15P82914 257 aaKnown RBP17.11■□□□□ 0.33
HDAC1-201ENST00000373548 UBE2V2Q15819 145 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 ZNF260Q3ZCT1 412 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 OR2W3Q7Z3T1 314 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 TMEM178AQ8NBL3 297 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 CCDC54Q8NEL0 328 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 OR2AE1Q8NHA4 323 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 CAPSLQ8WWF8 208 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 PP6455Q8WZ26 134 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 DVL3Q92997 716 aaPredicted RBP17.11■□□□□ 0.33
HDAC1-201ENST00000373548 MS4A3Q96HJ5 214 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 CHST5Q9GZS9 411 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 EXO5Q9H790 373 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 RNF122Q9H9V4 155 aa17.11■□□□□ 0.33
HDAC1-201ENST00000373548 ICMTO60725 284 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 MTRF1O75570 445 aaKnown RBP17.1■□□□□ 0.33
HDAC1-201ENST00000373548 HPXP02790 462 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 YES1P07947 543 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 CCL11P51671 97 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 IFITM2Q01629 132 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 NRN1LQ496H8 165 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 TMEM104Q8NE00 496 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 DACT3Q96B18 629 aaPredicted RBP17.1■□□□□ 0.33
HDAC1-201ENST00000373548 GPER1Q99527 375 aa17.1■□□□□ 0.33
HDAC1-201ENST00000373548 PRAF2O60831 178 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 FARS2O95363 451 aaKnown RBP17.09■□□□□ 0.33
HDAC1-201ENST00000373548 ARF1P84077 181 aaKnown RBP17.09■□□□□ 0.33
HDAC1-201ENST00000373548 STEAP1BQ6NZ63 245 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 ZNF782Q6ZMW2 699 aaPredicted RBP17.09■□□□□ 0.33
HDAC1-201ENST00000373548 Q6ZTK2 550 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 FGD2Q7Z6J4 655 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 GABRG1Q8N1C3 465 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 OR8S1Q8NH09 359 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 NPRL2Q8WTW4 380 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 C10orf35Q96D05 121 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 LDAHQ9H6V9 325 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 SPRR3Q9UBC9 169 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 A0A1B0GUH1 482 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 RPL36A-HNRNPH2H7BZ11 118 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 ALX3O95076 343 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 C1QBP02746 253 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 LCATP04180 440 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 KISS1Q15726 138 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 LIX1LQ8IVB5 337 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 TMEM229BQ8NBD8 167 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 FDCSPQ8NFU4 85 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 REEP6Q96HR9 211 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 NICN1Q9BSH3 213 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 LPAR5Q9H1C0 372 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 ZDHHC11Q9H8X9 412 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 KLK13Q9UKR3 277 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 CELSR3Q9NYQ7 3312 aa17.09■□□□□ 0.33
HDAC1-201ENST00000373548 TRGV5A0A0B4J1U4 118 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 SMLR1H3BR10 107 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 TGM6O95932 706 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 CXCL3P19876 107 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 ACKR3P25106 362 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 RAD52P43351 418 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 GZMKP49863 264 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 FOXG1P55316 489 aaPredicted RBP17.08■□□□□ 0.33
HDAC1-201ENST00000373548 TAS2R19P59542 299 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 CDNFQ49AH0 187 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 C9orf135Q5VTT2 229 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 CHST4Q8NCG5 386 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 KCNG3Q8TAE7 436 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 WDYHV1Q96HA8 205 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 ARHGAP21Q5T5U3 1957 aa17.08■□□□□ 0.33
HDAC1-201ENST00000373548 DMXL1Q9Y485 3027 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 A0A0A6YYD4 124 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 CDC14BO60729 498 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 SCGNO76038 276 aa17.08■□□□□ 0.32
HDAC1-201ENST00000373548 MPIG6BO95866 241 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms