RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SF3B6Q9Y3B4 125 aaKnown RBP15.84■□□□□ 0.13
CDX4-201ENST00000373514 GPX5O75715 221 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 NAT2P11245 290 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 GABRA5P31644 462 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 CRYBB2P43320 205 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 VBP1P61758 197 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 NCS1P62166 190 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 PSG7Q13046 419 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 GK2Q14410 553 aaPredicted RBP15.84■□□□□ 0.13
CDX4-201ENST00000373514 NKPD1Q17RQ9 610 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 GFOD2Q3B7J2 385 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 LIPNQ5VXI9 398 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 TMEM203Q969S6 136 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 MBD6Q96DN6 1003 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 SORCS2Q96PQ0 1159 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 MROQ9BYG7 248 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 FAM206AQ9NX38 181 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 EDARQ9UNE0 448 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 STUB1Q9UNE7 303 aa15.84■□□□□ 0.13
CDX4-201ENST00000373514 ARID1AO14497 2285 aa15.83■□□□□ 0.13
CDX4-201ENST00000373514 TANC2Q9HCD6 1990 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 TRIM64BA6NI03 449 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 VSTM5A8MXK1 200 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 M0R233 179 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 OGG1O15527 345 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 PLPP2O43688 288 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 SRSF10O75494 262 aaKnown RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 LY6HO94772 140 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 RPP14O95059 124 aaKnown RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 IGHV3-13P01766 116 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 IGHV4-39P01824 125 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 RIDAP52758 137 aaKnown RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 SLC3A1Q07837 685 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 SPCS2Q15005 226 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 CDK5R1Q15078 307 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 DMKNQ6E0U4 476 aaPredicted RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 RPL22L1Q6P5R6 122 aaKnown RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 OR5AS1Q8N127 324 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 OR8B12Q8NGG6 310 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 RNF166Q96A37 237 aaPredicted RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 VRK1Q99986 396 aaPredicted RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 TMED9Q9BVK6 235 aa15.83■□□□□ 0.12
CDX4-201ENST00000373514 EXOSC4Q9NPD3 245 aaKnown RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 PURGQ9UJV8 347 aaKnown RBP15.83■□□□□ 0.12
CDX4-201ENST00000373514 TEX15Q9BXT5 2789 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 CCDC168Q8NDH2 2452 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 H7C417 338 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 SLC22A1O15245 554 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 LILRA1O75019 489 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 PNPP00491 289 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 TGFBR1P36897 503 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 TGM4P49221 684 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 PPOXP50336 477 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 ART1P52961 327 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 ZNF92Q03936 586 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 MRPL28Q13084 256 aaKnown RBP15.82■□□□□ 0.12
CDX4-201ENST00000373514 CCDC58Q4VC31 144 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 OR2T2Q6IF00 324 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 FBXW12Q6X9E4 464 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 BHLHE23Q8NDY6 225 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 OR5L1Q8NGL2 311 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 HAVCR2Q8TDQ0 301 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 PPP1R14AQ96A00 147 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 CENPOQ9BU64 300 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 GSX2Q9BZM3 304 aa15.82■□□□□ 0.12
CDX4-201ENST00000373514 ZNF701Q9NV72 531 aaPredicted RBP15.82■□□□□ 0.12
CDX4-201ENST00000373514 ZSCAN5BA6NJL1 495 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 TIMM8AO60220 97 aaPredicted RBP15.81■□□□□ 0.12
CDX4-201ENST00000373514 EVX1P49640 407 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 MMP15P51511 669 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 ATP5J2P56134 94 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 DEGS2Q6QHC5 323 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 GDPGP1Q6ZNW5 385 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 KRTAP1-3Q8IUG1 177 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 C1orf174Q8IYL3 243 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 SMIM19Q96E16 107 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 TRMT61AQ96FX7 289 aaKnown RBP15.81■□□□□ 0.12
CDX4-201ENST00000373514 PGAM5Q96HS1 289 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 SOX7Q9BT81 388 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 RNF167Q9H6Y7 350 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 NIPAL2Q9H841 368 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 MSL2Q9HCI7 577 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 SSR3Q9UNL2 185 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 GTF2A1LQ9UNN4 478 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 PMF1-BGLAPU3KQ54 211 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 MYO9AB2RTY4 2548 aa15.81■□□□□ 0.12
CDX4-201ENST00000373514 TRBV2A0A0J9YWF9 115 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 TMEM269A0A1B0GVZ9 245 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 ZNF254O75437 659 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 RAC2P15153 192 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 KITLGP21583 273 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 SELENOVP59797 346 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 NANOS3P60323 173 aaKnown RBP15.8■□□□□ 0.12
CDX4-201ENST00000373514 FABP5Q01469 135 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 MALLQ13021 153 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 MRPL21Q7Z2W9 205 aaKnown RBP15.8■□□□□ 0.12
CDX4-201ENST00000373514 NDNFQ8TB73 568 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 RPS4Y2Q8TD47 263 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 HAVCR1Q96D42 359 aa15.8■□□□□ 0.12
CDX4-201ENST00000373514 PGLYRP3Q96LB9 341 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms