RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 HIST3H3Q16695 136 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 GCSAMLQ5JQS6 135 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ZNF774Q6NX45 483 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ZNF773Q6PK81 442 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 IGFL2Q6UWQ7 119 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ZAR1Q86SH2 424 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 LYPD6Q86Y78 171 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 TMEM105Q8N8V8 129 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 OR11H1Q8NG94 326 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 OR11H2Q8NH07 326 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 CYGBQ8WWM9 190 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 FCGR1BQ92637 280 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 C14orf144Q96I85 54 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 OR6C1Q96RD1 312 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 WFDC6Q9BQY6 131 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 CXorf21Q9HAI6 301 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SIRT7Q9NRC8 400 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 CALML5Q9NZT1 146 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 FLVCR1Q9Y5Y0 555 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ARHGAP21Q5T5U3 1957 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 CCDC182A6NF36 153 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 C21orf140B9A014 251 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 NPIPA7E9PJI5 369 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 BHLHE40O14503 412 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 XRCC2O43543 280 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PLPP2O43688 288 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 UGT2B11O75310 529 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SRSF10O75494 262 aaKnown RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 IGKV1D-16P01601 117 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 NPIPA8P0DM63 369 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SRD5A1P18405 259 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 FASP25445 335 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PIGAP37287 484 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 EFNB2P52799 333 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 TMBIM6P55061 237 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 MAD2L1BPQ15013 274 aaPredicted RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 AKIRIN2Q53H80 203 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 DGAT2L6Q6ZPD8 337 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 RASSF6Q6ZTQ3 369 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 TRAPPC5Q8IUR0 188 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 VANGL1Q8TAA9 524 aaPredicted RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 BORCS5Q969J3 196 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 IL17FQ96PD4 163 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 OR7D2Q96RA2 312 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 CSF3RQ99062 836 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 C1orf50Q9BV19 199 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PTDSS2Q9BVG9 487 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ANKHQ9HCJ1 492 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 IFT46Q9NQC8 304 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ZNF221Q9UK13 617 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SLC22A23A1A5C7 686 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 METTL15A6NJ78 407 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 FFAR3O14843 346 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 GPR42O15529 346 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 GABARAPO95166 117 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 C6orf47O95873 294 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 IGLV3-1P01715 115 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 POLR2IP36954 125 aaKnown RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 MEOX2P50222 304 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 IDH3GP51553 393 aaPredicted RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 SKP2Q13309 424 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 GPR50Q13585 617 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PGGHGQ32M88 737 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 VASNQ6EMK4 673 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 TRIM40Q6P9F5 258 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 DOK6Q6PKX4 331 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 C6orf120Q7Z4R8 191 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 S100A7AQ86SG5 101 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 HAPLN4Q86UW8 402 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SYT12Q8IV01 421 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 TMEM251Q8N6I4 163 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 OR11L1Q8NGX0 322 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PIFOQ8TCI5 191 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 MOB3AQ96BX8 217 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PYCR2Q96C36 320 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 POM121L2Q96KW2 1035 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 IMMP1LQ96LU5 166 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 F2RL3Q96RI0 385 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SDF2Q99470 211 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 C12orf57Q99622 126 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SLC35A5Q9BS91 424 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 MED18Q9BUE0 208 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 GGACTQ9BVM4 153 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 DPAGT1Q9H3H5 408 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 NMNAT1Q9HAN9 279 aaPredicted RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 C14orf105Q9NVL8 296 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SLC6A5Q9Y345 797 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 FKBP7Q9Y680 259 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 UNC80Q8N2C7 3258 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ZNF318Q5VUA4 2279 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TRIOBPQ9H2D6 2365 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 IGKV1D-42A0A075B6H8 117 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 PCP4L1A6NKN8 68 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 A6NNC1 897 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 HSPB2A8KAH6 182 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 CYP7B1O75881 506 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR2J3O76001 311 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TNFAIP8O95379 198 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 FABP3P05413 133 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 SP9P0CG40 484 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms