RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 IGHV1-46P01743 117 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 CA6P23280 308 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 ACKR3P25106 362 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 LIPAP38571 399 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 MAP2K3P46734 347 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 PTH2RP49190 550 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 CCL8P80075 99 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 SLC3A1Q07837 685 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 MRPL28Q13084 256 aaKnown RBP11.84□□□□□ -0.51
TPM3-211ENST00000368531 DOC2BQ14184 412 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 IRF3Q14653 427 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 ZNF485Q8NCK3 441 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 OR10AD1Q8NGE0 317 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 OR13G1Q8NGZ3 307 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 PIGCQ92535 297 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 NINJ1Q92982 152 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 YTHDF1Q9BYJ9 559 aaKnown RBP11.84□□□□□ -0.51
TPM3-211ENST00000368531 PPP1R3EQ9H7J1 279 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 TRIM36Q9NQ86 728 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 CYSLTR2Q9NS75 346 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 BEX4Q9NWD9 120 aaPredicted RBP11.84□□□□□ -0.51
TPM3-211ENST00000368531 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 CELSR2Q9HCU4 2923 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 FBN2P35556 2912 aa11.83□□□□□ -0.51
TPM3-211ENST00000368531 IGHV3-64DA0A0J9YX35 117 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 LOC107986453A0A1B0GWG9 222 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 H7C417 338 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 SSX4O60224 188 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 MTRF1O75570 445 aaKnown RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 IGLV3-1P01715 115 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 ERCC1P07992 297 aaPredicted RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 FAHP16930 419 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 DDOSTP39656 456 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 TGM4P49221 684 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 CCR9P51686 369 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 GABARAPL2P60520 117 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 TNFAIP6P98066 277 aaPredicted RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 CDK5R1Q15078 307 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 SPHARQ15513 63 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 OR8G1Q15617 311 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 OR8B8Q15620 311 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 SPRNQ5BIV9 151 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 ZMAT1Q5H9K5 638 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 DMRTC1Q5HYR2 192 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 TMEM244Q5VVB8 128 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 RNLSQ5VYX0 342 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 RPL22L1Q6P5R6 122 aaKnown RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 DOK3Q7L591 496 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 EGFL6Q8IUX8 553 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 CSNK2A3Q8NEV1 391 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 SEMA6DQ8NFY4 1073 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 OR10AC1Q8NH08 325 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 OR5AK2Q8NH90 309 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 ELMOD3Q96FG2 381 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 SLC30A2Q9BRI3 323 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 PAPOLGQ9BWT3 736 aaKnown RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 COMMD4Q9H0A8 199 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 DECR2Q9NUI1 292 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 ZNF701Q9NV72 531 aaPredicted RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 CGGBP1Q9UFW8 167 aaPredicted RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 ZNF391Q9UJN7 358 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
TPM3-211ENST00000368531 PIGLQ9Y2B2 252 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 RHBDD3Q9Y3P4 386 aa11.83□□□□□ -0.52
TPM3-211ENST00000368531 USF3Q68DE3 2245 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 ZNF850A8MQ14 1090 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 F5H5P2 479 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 OGG1O15527 345 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 MLNRO43193 412 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 DHRS3O75911 302 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 ZFPL1O95159 310 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 IGHV4-39P01824 125 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 UBCP0CG48 685 aaKnown RBP11.82□□□□□ -0.52
TPM3-211ENST00000368531 GNALP38405 381 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 CHN2P52757 468 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 RIPPLY1Q0D2K3 151 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 CARTPTQ16568 116 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 CCDC58Q4VC31 144 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 OR14K1Q8NGZ2 314 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 HAVCR2Q8TDQ0 301 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 TREM2Q9NZC2 230 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 ZDHHC8Q9ULC8 765 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 V9GYS6 101 aa11.82□□□□□ -0.52
TPM3-211ENST00000368531 TMEM212A6NML5 194 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 LYNX1G3V0Z9 82 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 CDC14BO60729 498 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 NCR1O76036 304 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 HPXP02790 462 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 LYNX1P0DP58 116 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 CELP19835 753 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 ACHEP22303 614 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 TNFSF4P23510 183 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 RBMXP38159 391 aaKnown RBP11.81□□□□□ -0.52
TPM3-211ENST00000368531 EFNA4P52798 201 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 ART1P52961 327 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 HNRNPA0Q13151 305 aaKnown RBP11.81□□□□□ -0.52
TPM3-211ENST00000368531 PRDX4Q13162 271 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 MOB3CQ70IA8 216 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 SPARTQ8N0X7 666 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms