RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 SPINK2P20155 84 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 CNR1P21554 472 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 OR3A3P47888 321 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 OR3A2P47893 321 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 ATXN7L3Q14CW9 347 aaPredicted RBP12.15□□□□□ -0.46
SHC1-202ENST00000368445 ALKBH2Q6NS38 261 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 SULF2Q8IWU5 870 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 URM1Q9BTM9 101 aaKnown RBP12.15□□□□□ -0.46
SHC1-202ENST00000368445 POFUT1Q9H488 388 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 C12orf49Q9H741 205 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 MUC6Q6W4X9 2439 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 A0A1W2PNU3 283 aaPredicted RBP12.15□□□□□ -0.46
SHC1-202ENST00000368445 TMEM82A0PJX8 343 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 SOCS1O15524 211 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 SRSF10O75494 262 aaKnown RBP12.15□□□□□ -0.46
SHC1-202ENST00000368445 SLC22A5O76082 557 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 HTR3BO95264 441 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 CCL11P51671 97 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 OLFML2AQ68BL7 652 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 PGAP1Q75T13 922 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 RTN4RL2Q86UN3 420 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 ARMC10Q8N2F6 343 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 OR11H4Q8NGC9 324 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 PSMF1Q92530 271 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 SLC25A28Q96A46 364 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 FOXB1Q99853 325 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 MOB1AQ9H8S9 216 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 RHBDD3Q9Y3P4 386 aa12.15□□□□□ -0.46
SHC1-202ENST00000368445 DISC1C4P0D8 188 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 E9PLN8 166 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 ZNF883P0CG24 379 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 FSTP19883 344 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 BLVRBP30043 206 aaPredicted RBP12.14□□□□□ -0.47
SHC1-202ENST00000368445 KISS1Q15726 138 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 NLRC3Q7RTR2 1065 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 ZNF100Q8IYN0 542 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 PIGCQ92535 297 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 ITGB1BP2Q9UKP3 347 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 NBASA2RRP1 2371 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 CIB4A0PJX0 185 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 TMEM127O75204 238 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 HRH1P35367 487 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 LSM6P62312 80 aaKnown RBP12.14□□□□□ -0.47
SHC1-202ENST00000368445 GLDNQ6ZMI3 551 aaPredicted RBP12.14□□□□□ -0.47
SHC1-202ENST00000368445 OR2M7Q8NG81 312 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 KCNG3Q8TAE7 436 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 ELMOD3Q96FG2 381 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 FAM173AQ9BQD7 235 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 CST11Q9H112 138 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 SLA2Q9H6Q3 261 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 CA10Q9NS85 328 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 FRYQ5TBA9 3013 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 LRRC3CA6NJW4 275 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 ARPC5O15511 151 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 UNC119Q13432 240 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 ENDOGQ14249 297 aaKnown RBP12.14□□□□□ -0.47
SHC1-202ENST00000368445 SNAI3Q3KNW1 292 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 GPX8Q8TED1 209 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 SEC22AQ96IW7 307 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 DDA1Q9BW61 102 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 SLC23A1Q9UHI7 598 aa12.14□□□□□ -0.47
SHC1-202ENST00000368445 A0A1B0GUH1 482 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 ZNF780AO75290 641 aaPredicted RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 NTF4P34130 210 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 SCAND1P57086 179 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 PPIAP62937 165 aaKnown RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 SCRN3Q0VDG4 424 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 DLL4Q9NR61 685 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 MCTS1Q9ULC4 181 aaKnown RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 ROS1P08922 2347 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 RAB27BO00194 218 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 APOC1P02654 83 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 ZNF35P13682 527 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 PI3P19957 117 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 S100A1P23297 94 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 TUSC5Q8IXB3 177 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 MUC20Q8N307 709 aaPredicted RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 OR10R2Q8NGX6 335 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 CCDC107Q8WV48 283 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 WDR89Q96FK6 387 aaPredicted RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 GPR87Q9BY21 358 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 KLK13Q9UKR3 277 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 SDCBPO00560 298 aaPredicted RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 SPRY1O43609 319 aaPredicted RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 ZNF17P17021 662 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 TSPO2Q5TGU0 170 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 REEP6Q96HR9 211 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 ARHGAP5-AS1Q96IT6 56 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 FER1L6-AS2Q96M78 137 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
SHC1-202ENST00000368445 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
SHC1-202ENST00000368445 C13orf42A0A1B0GVH6 325 aa12.12□□□□□ -0.47
SHC1-202ENST00000368445 L7N2F9 121 aa12.12□□□□□ -0.47
SHC1-202ENST00000368445 CCSO14618 274 aa12.12□□□□□ -0.47
SHC1-202ENST00000368445 BPNT1O95861 308 aa12.12□□□□□ -0.47
SHC1-202ENST00000368445 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
SHC1-202ENST00000368445 HLA-HP01893 362 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms