RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR1P1Q8NH06 330 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 LSM10Q969L4 123 aaKnown RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 TOMM40LQ969M1 308 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 GALNT14Q96FL9 552 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 H0YIG0 161 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 XRCC2O43543 280 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 SLC35E2P0CK97 266 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 PDLIM3Q53GG5 364 aaPredicted RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 LCNL1Q6ZST4 164 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 RNF175Q8N4F7 328 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ARPC1AQ92747 370 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 LOC102724200A0A096LPH7 203 aaPredicted RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF264O43296 627 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF805Q5CZA5 627 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 MRPL17Q9NRX2 175 aaKnown RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 RCC2Q9P258 522 aaKnown RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 C19orf53Q9UNZ5 99 aaPredicted RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 PPIL1Q9Y3C6 166 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 GPR37O15354 613 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 MC4RP32245 332 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 WDR89Q96FK6 387 aaPredicted RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 GRAMD2BQ96HH9 432 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 SGPP1Q9BX95 441 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 PTP4A3O75365 173 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 TRAPPC6AO75865 159 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 SOX3P41225 446 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 LHX2P50458 406 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 GABREP78334 506 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CLEC4CQ8WTT0 213 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 SSUH2Q9Y2M2 353 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 GOLGA4Q13439 2230 aaKnown RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 MYH3P11055 1940 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 OR5B21A6NL26 309 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF726A6NNF4 738 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ADM5C9JUS6 153 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 MKRN2OSH3BPM6 223 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 NPY1RP25929 384 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 XAF1Q6GPH4 301 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 C1orf127Q8N9H9 656 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 EXTL1Q92935 676 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ST6GAL2Q96JF0 529 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM167BQ9NRX6 74 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF225Q9UK10 706 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 XRN1Q8IZH2 1706 aaKnown RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 NDUFA2O43678 99 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 AOAHP28039 575 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 MS4A13Q5J8X5 152 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ACSM5Q6NUN0 579 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 DBX2Q6ZNG2 339 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 DEFB128Q7Z7B8 93 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 KRTCAP2Q8N6L1 136 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM38BQ9NVV0 291 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 GABRA1P14867 456 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ATP1B3P54709 279 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM33P57088 247 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 TAS2R60P59551 318 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CARD17Q5XLA6 110 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CD99L2Q8TCZ2 262 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF775Q96BV0 537 aaPredicted RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 REEP6Q96HR9 211 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 FAM186AA6NE01 2351 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 RPS10P46783 165 aaKnown RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 PRTGQ2VWP7 1150 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ANKLE1Q8NAG6 615 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 AUTS2Q8WXX7 1259 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 AMY2AP04746 511 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ROM1Q03395 351 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ZXDCQ2QGD7 858 aaPredicted RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 PRSS54Q6PEW0 395 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF619Q8N2I2 560 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CDS1Q92903 461 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 S1PR5Q9H228 398 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CLDND1Q9NY35 253 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 IL36GQ9NZH8 169 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 UBE2CO00762 179 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 HBZP02008 142 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CBLN4Q9NTU7 201 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 PLAGL1Q9UM63 463 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 H3BNC9 293 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 NME4O00746 187 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 PTGER4P35408 488 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 GPR1P46091 355 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 DIO1P49895 249 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CASP6P55212 293 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 DEFB115Q30KQ5 88 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ADGRG7Q96K78 797 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 IQCF3P0C7M6 154 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 EDN3P14138 238 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 AKR1C2P52895 323 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 CTAG1AP78358 180 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 AKR1C1Q04828 323 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 TCTN1Q2MV58 587 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 WSB2Q9NYS7 404 aaPredicted RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 DHRS3O75911 302 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 ADRA1AP35348 466 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 RPS16P62249 146 aaKnown RBP3.4□□□□□ -1.87
SYNE1-207ENST00000367255 DLEU7Q6UYE1 221 aa3.4□□□□□ -1.87
SYNE1-207ENST00000367255 C11orf84Q9BUA3 381 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms