RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 RPL27P61353 136 aaKnown RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 IGLV3-21P80748 117 aaPredicted RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 HABP2Q14520 560 aaPredicted RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 TRIP6Q15654 476 aaKnown RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 EXT1Q16394 746 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 THEM4Q5T1C6 240 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 DHRS7BQ6IAN0 325 aaPredicted RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 FAAP20Q6NZ36 180 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 SPNS3Q6ZMD2 512 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 H1FNTQ75WM6 255 aaPredicted RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 RFLNBQ8N5W9 214 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 ARIH2OSQ8N7S6 290 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 OR8S1Q8NH09 359 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 MFSD8Q8NHS3 518 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 SEC22AQ96IW7 307 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 ZNF587BE7ETH6 402 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 ZNF354AO60765 605 aaPredicted RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 NME2P22392 152 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 DIO1P49895 249 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 ARG2P78540 354 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 SMIM15Q7Z3B0 74 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 MISPQ8IVT2 679 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 C17orf47Q8NEP4 570 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 OR11G2Q8NGC1 345 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 OR2Y1Q8NGV0 311 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 NUBPLQ8TB37 319 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 CT55Q8WUE5 264 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 ZNF75AQ96N20 296 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 SOX7Q9BT81 388 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 LRFN1Q9P244 771 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 GDF2Q9UK05 429 aaPredicted RBP8.21□□□□□ -1.1
CALD1-202ENST00000361901 WIF1Q9Y5W5 379 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 URGCP-MRPS24S4R325 110 aa8.21□□□□□ -1.1
CALD1-202ENST00000361901 FREM3P0C091 2139 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 MUC22E2RYF6 1773 aaPredicted RBP8.2□□□□□ -1.1
CALD1-202ENST00000361901 UBE2CO00762 179 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 CCL3P10147 92 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 TPT1P13693 172 aaKnown RBP8.2□□□□□ -1.1
CALD1-202ENST00000361901 PNLIPP16233 465 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 RPS4Y1P22090 263 aaKnown RBP8.2□□□□□ -1.1
CALD1-202ENST00000361901 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 OR2A2Q6IF42 318 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 APCDD1LQ8NCL9 501 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 TMED6Q8WW62 240 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 FKRPQ9H9S5 495 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 FGF20Q9NP95 211 aaPredicted RBP8.2□□□□□ -1.1
CALD1-202ENST00000361901 TCFL5Q9UL49 500 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 RPH3ALQ9UNE2 315 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 TMEM235A6NFC5 223 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 M0R143 59 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 RPL29P47914 159 aaKnown RBP8.2□□□□□ -1.1
CALD1-202ENST00000361901 ZNF84P51523 738 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 MYBPHQ13203 477 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 TMEM201Q5SNT2 666 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 KCTD9Q7L273 389 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 SSX7Q7RTT5 188 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 MDGA2Q7Z553 956 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 VASH2Q86V25 355 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 CASTOR1Q8WTX7 329 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 RNF141Q8WVD5 230 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 TAAR9Q96RI9 348 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 KLHL9Q9P2J3 617 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 IGKV3D-11A0A0A0MRZ8 115 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 PLSCR5A0PG75 271 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 DVL2O14641 736 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 TSPAN2O60636 221 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 ABOP16442 354 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 CPEP16870 476 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 DAP3P51398 398 aaKnown RBP8.2□□□□□ -1.1
CALD1-202ENST00000361901 HSF1Q00613 529 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 MICBQ29980 383 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 HBMQ6B0K9 141 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 SPINK14Q6IE38 97 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 ZNF627Q7L945 461 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 FAM181AQ8N9Y4 354 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 FAM71F1Q96KD3 344 aaPredicted RBP8.2□□□□□ -1.1
CALD1-202ENST00000361901 TSPAN32Q96QS1 320 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 ABHD1Q96SE0 405 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 NOX4Q9NPH5 578 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 CA10Q9NS85 328 aa8.2□□□□□ -1.1
CALD1-202ENST00000361901 C19orf67A6NJJ6 358 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 ZNF705FA8MVS1 300 aaPredicted RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 EEF1E1-BLOC1S5C9J1V9 151 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 DCTN6O00399 190 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 UBL3O95164 117 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 ARG1P05089 322 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 ZNF705DP0CH99 300 aaPredicted RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 ZNF705BP0CI00 300 aaPredicted RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 FGF7P21781 194 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 CDAP32320 146 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 APOBEC1P41238 236 aaKnown RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 TRA2AQ13595 282 aaKnown RBP eCLIP8.19□□□□□ -1.11e-6■■■■■ 43.4
CALD1-202ENST00000361901 ISXQ2M1V0 245 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 Q5PR19 223 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 TMEM91Q6ZNR0 172 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 MAML2Q8IZL2 1156 aaPredicted RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 ADGRL4Q9HBW9 690 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 UQCC1Q9NVA1 299 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms