RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 OR5AS1Q8N127 324 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 OR8B12Q8NGG6 310 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 OR10Z1Q8NGY1 313 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 ZNF775Q96BV0 537 aaPredicted RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 GPER1Q99527 375 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 PI4KAP42356 2102 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 ZNHIT1O43257 154 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 SIGLEC6O43699 453 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 TIAF1O95411 115 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 BLKP51451 505 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 ZNF121P58317 390 aaPredicted RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 RNF4P78317 190 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 SSBP1Q04837 148 aaKnown RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 SCRN3Q0VDG4 424 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 FAM57BQ71RH2 274 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 H1FNTQ75WM6 255 aaPredicted RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 SLC22A24Q8N4F4 322 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 SLC2A4RGQ9NR83 387 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 PLA2G2EQ9NZK7 142 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 B3GAT1Q9P2W7 334 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 A0A1B0GV50 99 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 GDF9O60383 454 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 DUS4LO95620 317 aaKnown RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 ZNF20P17024 532 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 ARFRP1Q13795 201 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 RPL7L1Q6DKI1 246 aaKnown RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 KLHL24Q6TFL4 600 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 BATF2Q8N1L9 274 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 DAZLQ92904 295 aaKnown RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 RAB3CQ96E17 227 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 C1orf147Q96MC9 270 aaPredicted RBP9.35□□□□□ -0.91
SMC3-201ENST00000361804 PIGMQ9H3S5 423 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 SERINC1Q9NRX5 453 aa9.35□□□□□ -0.91
SMC3-201ENST00000361804 IGKV1-9A0A0C4DH69 117 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 MEGF11A6BM72 1044 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 ISG15P05161 165 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 MUC1P15941 1255 aaPredicted RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 CBR1P16152 277 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 PVALBP20472 110 aaPredicted RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 HSD11B1P28845 292 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 LCN10Q6JVE6 187 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 BRICD5Q6PL45 260 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 HOGA1Q86XE5 327 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 BAP18Q8IXM2 172 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 OR13G1Q8NGZ3 307 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 EDAQ92838 391 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 METTL8Q9H825 291 aaKnown RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 ELL3Q9HB65 397 aaPredicted RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 KLHL13Q9P2N7 655 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 CYB5R1Q9UHQ9 305 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 TRIOBPQ9H2D6 2365 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 LRP3O75074 770 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 TPPPO94811 219 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 MYBPHQ13203 477 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 C14orf28Q4W4Y0 310 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 SLCO5A1Q9H2Y9 848 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 AKIRIN1Q9H9L7 192 aaPredicted RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 ZNF629Q9UEG4 869 aaPredicted RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 RPH3AQ9Y2J0 694 aaPredicted RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 KIAA1549Q9HCM3 1950 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 ZFHX3Q15911 3703 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 LY6G6EA0A0G2JKS1 128 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 DBX1A6NMT0 343 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 HSPB2A8KAH6 182 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 H7C2Y5 167 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 FAM157CP0CG43 387 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 SPP1P10451 314 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 LPAR6P43657 344 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 SRSF4Q08170 494 aaKnown RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 HSPB2Q16082 182 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 SHEQ5VZ18 495 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 RTBDNQ9BSG5 229 aaPredicted RBP9.34□□□□□ -0.91
SMC3-201ENST00000361804 SLC2A8Q9NY64 477 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 KLRF1Q9NZS2 232 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 U3KQA8 63 aa9.34□□□□□ -0.91
SMC3-201ENST00000361804 SHANK1Q9Y566 2161 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 IGHV3-15A0A0B4J1V0 119 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 TTLL8A6PVC2 850 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 TMEM14DPA8MWL7 114 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 MASP2O00187 686 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 MBTPS2O43462 519 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 CDC14BO60729 498 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 SERPINA2P20848 420 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 MMP16P51512 607 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 RIPPLY1Q0D2K3 151 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 OR5D14Q8NGL3 314 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 TERB2Q8NHR7 220 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 DYRK2Q92630 601 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 BSCL2Q96G97 398 aaPredicted RBP9.33□□□□□ -0.92
SMC3-201ENST00000361804 CHST11Q9NPF2 352 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 NME1P15531 152 aaKnown RBP9.33□□□□□ -0.92
SMC3-201ENST00000361804 CD38P28907 300 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 CCR5P51681 352 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 PRAMEF20Q5VT98 475 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 LPCAT3Q6P1A2 487 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 NKAIN3Q8N8D7 197 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 ZNF441Q8N8Z8 693 aa9.33□□□□□ -0.92
SMC3-201ENST00000361804 APCDD1LQ8NCL9 501 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms