RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 DCTDP32321 178 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 C17orf78Q8N4C9 275 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 DEFB123Q8N688 67 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 CLEC18CQ8NCF0 446 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 UBE2ZQ9H832 354 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 PLEKHA2Q9HB19 425 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 FIGNL2A6NMB9 653 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 CLDN20P56880 219 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 TDHQ8IZJ6 230 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 CABLES2Q9BTV7 478 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF768Q9H5H4 540 aaKnown RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 SLC25A19Q9HC21 320 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 MGMTP16455 207 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 ATF1P18846 271 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 PRDX4Q13162 271 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 CDK5R1Q15078 307 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 TMEM179BQ7Z7N9 219 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 NHLRC2Q8NBF2 726 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 DYNC2LI1Q8TCX1 351 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 KISS1RQ969F8 398 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 PLPPR2Q96GM1 343 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 PDFQ9HBH1 243 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 OR2W5A6NFC9 320 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 PCBP4P57723 403 aaKnown RBP16.58■□□□□ 0.25
SHANK1-202ENST00000359082 SLC25A35Q3KQZ1 300 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 TCTN3Q6NUS6 607 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 ZBTB44Q8NCP5 570 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 MRGPRX1Q96LB2 322 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 LINC01565O15544 149 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 Q56UQ5 140 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 STUMQ69YW2 141 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 OR4S1Q8NGB4 309 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 DCAF16Q9NXF7 216 aa16.58■□□□□ 0.25
SHANK1-202ENST00000359082 CTSLP07711 333 aa16.58■□□□□ 0.24
SHANK1-202ENST00000359082 VAMP3Q15836 100 aa16.58■□□□□ 0.24
SHANK1-202ENST00000359082 OR52N4Q8NGI2 321 aa16.58■□□□□ 0.24
SHANK1-202ENST00000359082 FAHP16930 419 aa16.58■□□□□ 0.24
SHANK1-202ENST00000359082 GFRALQ6UXV0 394 aa16.58■□□□□ 0.24
SHANK1-202ENST00000359082 PELI1Q96FA3 418 aa16.58■□□□□ 0.24
SHANK1-202ENST00000359082 HMX2A2RU54 273 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 NME1P15531 152 aaKnown RBP16.57■□□□□ 0.24
SHANK1-202ENST00000359082 CCR5P51681 352 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 CNN1P51911 297 aaKnown RBP16.57■□□□□ 0.24
SHANK1-202ENST00000359082 ERVFC1-1P60608 527 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 SMIM21Q3B7S5 101 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 IP6K3Q96PC2 410 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 A0A1W2PPQ1 181 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 TRIM77I1YAP6 450 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 ETHE1O95571 254 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 ONECUT2O95948 504 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 OR2V1Q8NHB1 315 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 CBY1Q9Y3M2 126 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 TRGV10A0A0A0MS01 117 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 H3BP45 60 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 AMTP48728 403 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 FOXC1Q12948 553 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 SPNS2Q8IVW8 549 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 OR2Z1Q8NG97 314 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 FBXO17Q96EF6 278 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 ZDHHC11Q9H8X9 412 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 AKR7A2O43488 359 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 CYC1P08574 325 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 ASCL1P50553 236 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 PDCD1Q15116 288 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 MISP3Q96FF7 219 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 PLCH1Q4KWH8 1693 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 IGFBP6P24592 240 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-202ENST00000359082 CLEC5AQ9NY25 188 aa16.57■□□□□ 0.24
SHANK1-202ENST00000359082 ANKUB1A6NFN9 424 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 GOSR1O95249 250 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 ARRB2P32121 409 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 SYS1Q8N2H4 156 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 MYH9P35579 1960 aaKnown RBP16.56■□□□□ 0.24
SHANK1-202ENST00000359082 POM121L2Q96KW2 1035 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 BTAF1O14981 1849 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 CD1EP15812 388 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 FUT6P51993 359 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 RAB1AP62820 205 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 GPNMBQ14956 572 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 ZPBPQ9BS86 351 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 ZNF391Q9UJN7 358 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 LRRC3CA6NJW4 275 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 PNLIPRP2P54317 469 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 LRRC10Q5BKY1 277 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 OR4C16Q8NGL9 310 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 CLDN23Q96B33 292 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 DUS3LQ96G46 650 aaKnown RBP16.56■□□□□ 0.24
SHANK1-202ENST00000359082 ALKBH3Q96Q83 286 aaPredicted RBP16.56■□□□□ 0.24
SHANK1-202ENST00000359082 ZBTB25P24278 435 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 TMEM240Q5SV17 173 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 ADPRHL1Q8NDY3 354 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 MYEOVQ96EZ4 313 aa16.56■□□□□ 0.24
SHANK1-202ENST00000359082 YTHDF2Q9Y5A9 579 aaKnown RBP16.56■□□□□ 0.24
SHANK1-202ENST00000359082 LOC102723971A0A1B0GUV8 181 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 A0A1W2PR80 420 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 CD37P11049 281 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 COMMD1Q8N668 190 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 ADGRG7Q96K78 797 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 ADAT1Q9BUB4 502 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms