RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SERPINF1P36955 418 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 TAS2R31P59538 309 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 SNTB1Q13884 538 aaKnown RBP7.59□□□□□ -1.19
RFX3-202ENST00000358730 SHBQ15464 509 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 TMEM176BQ3YBM2 270 aaPredicted RBP7.59□□□□□ -1.19
RFX3-202ENST00000358730 SLC25A47Q6Q0C1 308 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 UNQ6126/PRO20091Q6UXV3 157 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 TDHQ8IZJ6 230 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 SPACA9Q96E40 222 aaPredicted RBP7.59□□□□□ -1.19
RFX3-202ENST00000358730 NARS2Q96I59 477 aaKnown RBP7.59□□□□□ -1.19
RFX3-202ENST00000358730 CYYR1Q96J86 154 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 C1orf147Q96MC9 270 aaPredicted RBP7.59□□□□□ -1.19
RFX3-202ENST00000358730 CHMP1AQ9HD42 196 aaPredicted RBP7.59□□□□□ -1.19
RFX3-202ENST00000358730 PNRC2Q9NPJ4 139 aaKnown RBP7.59□□□□□ -1.19
RFX3-202ENST00000358730 ZC4H2Q9NQZ6 224 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 CNTRLQ7Z7A1 2325 aa7.59□□□□□ -1.19
RFX3-202ENST00000358730 PI4KAP42356 2102 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 CRHP06850 196 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 ZNF17P17021 662 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 NPY4RP50391 375 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 ZNF273Q14593 569 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 DOK3Q7L591 496 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 NAA40Q86UY6 237 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 TMEM17Q86X19 198 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 OR5D18Q8NGL1 313 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 DCUN1D4Q92564 292 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 OXGR1Q96P68 337 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 RASL10BQ96S79 203 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 ARPC5LQ9BPX5 153 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 DEFB126Q9BYW3 111 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 CSAG2Q9Y5P2 127 aa7.59□□□□□ -1.2
RFX3-202ENST00000358730 RAD51DO75771 328 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 PSMB6P28072 239 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 PPIAP62937 165 aaKnown RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 DEFA5Q01523 94 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ARFRP1Q13795 201 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ACTBL2Q562R1 376 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 PAN3Q58A45 887 aaKnown RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 LCN10Q6JVE6 187 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ATRAIDQ6UW56 229 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ARRDC1Q8N5I2 433 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 BOLLQ8N9W6 283 aaKnown RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 OR56B1Q8NGI3 324 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 TERB2Q8NHR7 220 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 NPRL2Q8WTW4 380 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 SLC25A43Q8WUT9 341 aaPredicted RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 ARHGAP5-AS1Q96IT6 56 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 DNTTIP1Q9H147 329 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 UBE2ZQ9H832 354 aaPredicted RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 C19orf25Q9UFG5 118 aaPredicted RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 B3GALT1Q9Y5Z6 326 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 RTTNQ86VV8 2226 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 MYO7BQ6PIF6 2116 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 A0A1W2PQM1 296 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 AQP7P3A6NL99 342 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 DBX1A6NMT0 343 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 TRIM77I1YAP6 450 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 PGAM2P15259 253 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 AMY2BP19961 511 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 CCL1P22362 96 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 SLC6A9P48067 706 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 CLDN17P56750 224 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 GRB2P62993 217 aaKnown RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 CCL7P80098 99 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 SLC9A3R2Q15599 337 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 SGCAQ16586 387 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 TMEM128Q5BJH2 165 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 VAX1Q5SQQ9 334 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ZNF385CQ66K41 422 aaPredicted RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 TMPPEQ6ZT21 453 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 SPEM1Q8N4L4 309 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 WDSUB1Q8N9V3 476 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 PNLDC1Q8NA58 520 aaKnown RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 TMEM185AQ8NFB2 350 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 OR5H2Q8NGV7 314 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ZC3H10Q96K80 434 aaKnown RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 CCDC74BQ96LY2 380 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 MICU1Q9BPX6 476 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 URM1Q9BTM9 101 aaKnown RBP7.58□□□□□ -1.2
RFX3-202ENST00000358730 C5orf66Q9H5L9 145 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ASF1BQ9NVP2 202 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 ANAPC10Q9UM13 185 aa7.58□□□□□ -1.2
RFX3-202ENST00000358730 IGKV1-9A0A0C4DH69 117 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 IGHV5-10-1A0A0J9YXX1 117 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 C5orf63A6NC05 138 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 MFNGO00587 321 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 PI3P19957 117 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 TMEM50BP56557 158 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 MC2RQ01718 297 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 PPP1R3BQ86XI6 285 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 LRRC46Q96FV0 321 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 PGAM5Q96HS1 289 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 OR10A2Q9H208 303 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 PRR13Q9NZ81 148 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 PRELID1Q9Y255 219 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 HDGFL3Q9Y3E1 203 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 E9PLN8 166 aa7.57□□□□□ -1.2
RFX3-202ENST00000358730 TLX3O43711 291 aaPredicted RBP7.57□□□□□ -1.2
RFX3-202ENST00000358730 HTR3BO95264 441 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms