RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TMEM255AQ5JRV8 349 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 DMKNQ6E0U4 476 aaPredicted RBP13.05□□□□□ -0.32
TPM1-206ENST00000358278 DOK3Q7L591 496 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 RDH10Q8IZV5 341 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 FTMTQ8N4E7 242 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 UFD1Q92890 307 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 MGLLQ99685 303 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 SOX7Q9BT81 388 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 PLEKHA1Q9HB21 404 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 DYNLRB1Q9NP97 96 aa13.05□□□□□ -0.32
TPM1-206ENST00000358278 IQCF6A8MYZ5 107 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 ISG15P05161 165 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 RPSAP08865 295 aaKnown RBP13.04□□□□□ -0.32
TPM1-206ENST00000358278 BMP4P12644 408 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 ACHEP22303 614 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 PSMB9P28065 219 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 ALDH3B1P43353 468 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 MAP2K3P46734 347 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 MLLT11Q13015 90 aaPredicted RBP13.04□□□□□ -0.32
TPM1-206ENST00000358278 OR8B8Q15620 311 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 UBE2UQ5VVX9 321 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 KCTD8Q6ZWB6 473 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 DTX2Q86UW9 622 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 SEMA6DQ8NFY4 1073 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 RPS4Y2Q8TD47 263 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 CCL19Q99731 98 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 CGGBP1Q9UFW8 167 aaPredicted RBP13.04□□□□□ -0.32
TPM1-206ENST00000358278 HHLA2Q9UM44 414 aa13.04□□□□□ -0.32
TPM1-206ENST00000358278 A0A1B0GTI1 187 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 LOC390937A0A1W2PQ73 354 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 PLPP2O43688 288 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 ZNF12P17014 697 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 CCL1P22362 96 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 DDOSTP39656 456 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 KRTAP10-9P60411 292 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 SWI5Q1ZZU3 235 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 ZMAT1Q5H9K5 638 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 LIPKQ5VXJ0 399 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 CSNK2A3Q8NEV1 391 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 OR13C3Q8NGS6 347 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 TSEN15Q8WW01 171 aaKnown RBP13.03□□□□□ -0.32
TPM1-206ENST00000358278 NRGNQ92686 78 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 GHSRQ92847 366 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 TRAF4Q9BUZ4 470 aaPredicted RBP13.03□□□□□ -0.32
TPM1-206ENST00000358278 ISYNA1Q9NPH2 558 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 ZNF281Q9Y2X9 895 aa13.03□□□□□ -0.32
TPM1-206ENST00000358278 MAGEA13PA6NCF6 341 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 ANKRD30BLA7E2S9 258 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 ACKR3P25106 362 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 LIPAP38571 399 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 RIPPLY1Q0D2K3 151 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 MST1LQ2TV78 715 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 C11orf71Q6IPW1 123 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 CCDC54Q8NEL0 328 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 OR8G5Q8NG78 346 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 OR51A4Q8NGJ6 313 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 OR10AC1Q8NH08 325 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 PGLYRP3Q96LB9 341 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 MSL2Q9HCI7 577 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 CYSLTR2Q9NS75 346 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 FBXO9Q9UK97 447 aaPredicted RBP13.02□□□□□ -0.32
TPM1-206ENST00000358278 PIGLQ9Y2B2 252 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 PMF1-BGLAPU3KQ54 211 aa13.02□□□□□ -0.32
TPM1-206ENST00000358278 NAV2Q8IVL1 2488 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 LILRA1O75019 489 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 INMTO95050 263 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 CD8AP01732 235 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 NAT2P11245 290 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 FAHP16930 419 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 MMP15P51511 669 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 TNK1Q13470 666 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 TSTQ16762 297 aaKnown RBP13.02□□□□□ -0.33
TPM1-206ENST00000358278 ARMCX4Q5H9R4 360 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 PAMR1Q6UXH9 720 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 PLPP7Q8NBV4 271 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 GPR148Q8TDV2 347 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 ITFG2Q969R8 447 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 PAPOLGQ9BWT3 736 aaKnown RBP13.02□□□□□ -0.33
TPM1-206ENST00000358278 CACNG6Q9BXT2 260 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 LIME1Q9H400 295 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 MRPL15Q9P015 296 aaKnown RBP13.02□□□□□ -0.33
TPM1-206ENST00000358278 EDARQ9UNE0 448 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 V9GYS6 101 aa13.02□□□□□ -0.33
TPM1-206ENST00000358278 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
TPM1-206ENST00000358278 DHRS7CA6NNS2 312 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 OCM2P0CE71 109 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 SMIM18P0DKX4 95 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 CPEP16870 476 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 GNALP38405 381 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 ZNF81P51508 661 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 GPR50Q13585 617 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 TPBGQ13641 420 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 YIF1BQ5BJH7 314 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 OR14K1Q8NGZ2 314 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 GTF3AQ92664 365 aaKnown RBP13.01□□□□□ -0.33
TPM1-206ENST00000358278 VRK1Q99986 396 aaPredicted RBP13.01□□□□□ -0.33
TPM1-206ENST00000358278 TMED9Q9BVK6 235 aa13.01□□□□□ -0.33
TPM1-206ENST00000358278 MRPS26Q9BYN8 205 aaKnown RBP13.01□□□□□ -0.33
TPM1-206ENST00000358278 MS4A5Q9H3V2 200 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms