RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SERPINF1P36955 418 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 SOX2P48431 317 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 ALDH3B2P48448 385 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 KLF3P57682 345 aaPredicted RBP21.71■■□□□ 1.07
SSBP3-202ENST00000357475 MST1LQ2TV78 715 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 Q6ZSR3 168 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 DOK3Q7L591 496 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 TMEM200AQ86VY9 491 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 MARVELD3Q96A59 401 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 TUBG2Q9NRH3 451 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 NDUFB11Q9NX14 153 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 HHLA2Q9UM44 414 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 CCRL2O00421 344 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 DHRS3O75911 302 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 IGHV3-13P01766 116 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 FAHP16930 419 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 GPR50Q13585 617 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 FBXW5Q969U6 566 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 ORAI1Q96D31 301 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 PLK3Q9H4B4 646 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 PLEKHF2Q9H8W4 249 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 SCOCQ9UIL1 159 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 ZNF391Q9UJN7 358 aa21.7■■□□□ 1.07
SSBP3-202ENST00000357475 TACC2O95359 2948 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 H3BSA7 217 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 PRF1P14222 555 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 KITLGP21583 273 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 CFL1P23528 166 aaKnown RBP21.7■■□□□ 1.06
SSBP3-202ENST00000357475 TTKP33981 857 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 DMRTC1Q5HYR2 192 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 SEMA6DQ8NFY4 1073 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 OR13C3Q8NGS6 347 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 ADAT3Q96EY9 351 aaPredicted RBP21.7■■□□□ 1.06
SSBP3-202ENST00000357475 TRMT61AQ96FX7 289 aaKnown RBP21.7■■□□□ 1.06
SSBP3-202ENST00000357475 OR14A2Q96R54 314 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 PIGLQ9Y2B2 252 aa21.7■■□□□ 1.06
SSBP3-202ENST00000357475 TRBV5-5A0A0J9YX44 114 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 LOC390937A0A1W2PQ73 354 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 IQCF6A8MYZ5 107 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 TIMM8AO60220 97 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-202ENST00000357475 SOD3P08294 240 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 ALDH3B1P43353 468 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 FABP5Q01469 135 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 YIF1BQ5BJH7 314 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 MUC15Q8N387 334 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 GPR148Q8TDV2 347 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 TSEN15Q8WW01 171 aaKnown RBP21.69■■□□□ 1.06
SSBP3-202ENST00000357475 DVL3Q92997 716 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-202ENST00000357475 C14orf79Q96F83 325 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 OPA3Q9H6K4 179 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 ZNF275Q9NSD4 429 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-202ENST00000357475 TAAR3PQ9P1P4 343 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 RHBDD3Q9Y3P4 386 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 ARFGEF3Q5TH69 2177 aa21.69■■□□□ 1.06
SSBP3-202ENST00000357475 A0A1W2PPK0 400 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 A0A1W2PPW3 197 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 ANKRD61A6NGH8 418 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 GABRA5P31644 462 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 KRTAP10-9P60411 292 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 ASPHD2Q6ICH7 369 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 TMEM91Q6ZNR0 172 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 Q6ZR03 302 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 OR13F1Q8NGS4 319 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 FGGYQ96C11 551 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 YIPF6Q96EC8 236 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 MSL2Q9HCI7 577 aa21.68■■□□□ 1.06
SSBP3-202ENST00000357475 HECTD1Q9ULT8 2610 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 CD8AP01732 235 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 DANCRP0C864 163 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 OCM2P0CE71 109 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 CD36P16671 472 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 MAP2K3P46734 347 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 MMP15P51511 669 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 FAM27D1Q5T7N8 215 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 PPIL3Q9H2H8 161 aaKnown RBP21.67■■□□□ 1.06
SSBP3-202ENST00000357475 DHDHQ9UQ10 334 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 AKAP6Q13023 2319 aa21.67■■□□□ 1.06
SSBP3-202ENST00000357475 MTRF1O75570 445 aaKnown RBP21.66■■□□□ 1.06
SSBP3-202ENST00000357475 EFNB3Q15768 340 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 SWI5Q1ZZU3 235 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 ACSM3Q53FZ2 586 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 FBXL14Q8N1E6 418 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 ZCCHC24Q8N2G6 241 aaKnown RBP21.66■■□□□ 1.06
SSBP3-202ENST00000357475 ZNF611Q8N823 705 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 NRGNQ92686 78 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 OR51E2Q9H255 320 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 GPR160Q9UJ42 338 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 DSCAMO60469 2012 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 CACNA1DQ01668 2161 aa21.66■■□□□ 1.06
SSBP3-202ENST00000357475 ZSCAN5BA6NJL1 495 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 H0YL77 283 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 PIN1P1O15428 100 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 SC5DO75845 299 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 NAT2P11245 290 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 CD53P19397 219 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 GADD45AP24522 165 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 RIPPLY1Q0D2K3 151 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 Q499Y3 187 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 TMEM106AQ96A25 262 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 LIME1Q9H400 295 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms