RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 BEX1Q9HBH7 125 aa8.86□□□□□ -0.99
CAPN3-204ENST00000356316 SAMHD1Q9Y3Z3 626 aaKnown RBP8.86□□□□□ -0.99
CAPN3-204ENST00000356316 COMMD3-BMI1R4GMX3 469 aa8.86□□□□□ -0.99
CAPN3-204ENST00000356316 U3KQV3 271 aa8.86□□□□□ -0.99
CAPN3-204ENST00000356316 MDFIC2A0A1B0GVS7 189 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 FAM181BA6NEQ2 426 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 B2RBV5 119 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 KNG1P01042 644 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 SPI1P17947 270 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 MDKP21741 143 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-204ENST00000356316 OMGP23515 440 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 CFL1P23528 166 aaKnown RBP8.85□□□□□ -0.99
CAPN3-204ENST00000356316 CFHR2P36980 270 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 GNALP38405 381 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 NAA10P41227 235 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-204ENST00000356316 CX3CR1P49238 355 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 PPP1R8Q12972 351 aaKnown RBP8.85□□□□□ -0.99
CAPN3-204ENST00000356316 SNCBQ16143 134 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 MICBQ29980 383 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 C11orf91Q3C1V1 193 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 ZNF770Q6IQ21 691 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-204ENST00000356316 FIP1L1Q6UN15 594 aaKnown RBP8.85□□□□□ -0.99
CAPN3-204ENST00000356316 LYPD4Q6UWN0 246 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 Q6YL49 198 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 ZNF826PQ6ZT77 177 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 DPY19L4Q7Z388 723 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 ARHGAP24Q8N264 748 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 SCCPDHQ8NBX0 429 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 OR56B2PQ8NGI1 322 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 OR52H1Q8NGJ2 320 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 OR4F5Q8NH21 305 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 LRGUKQ96M69 825 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 WDFY2Q96P53 400 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 OCSTAMPQ9BR26 566 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 MUC13Q9H3R2 512 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 PRDM13Q9H4Q3 707 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 MAGIXQ9H6Y5 334 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 ACOXLQ9NUZ1 547 aa8.85□□□□□ -0.99
CAPN3-204ENST00000356316 IGHV3OR15-7A0A075B7D8 119 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 CENPVL3A0A0U1RRI6 287 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 DHRS12A0PJE2 317 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 C22orf46C9J442 243 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 H3BN98 237 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 DVL1O14640 695 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 TIPRLO75663 272 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SOX14O95416 240 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SFTPBP07988 381 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 MUC1P15941 1255 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-204ENST00000356316 PAICSP22234 425 aaKnown RBP8.84□□□□□ -0.99
CAPN3-204ENST00000356316 ARF6P62330 175 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 POU4F2Q12837 409 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 PCK2Q16822 640 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 OR2T5Q6IEZ7 315 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 TREML4Q6UXN2 200 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 BTN2A1Q7KYR7 527 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SHFQ7M4L6 423 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SLC16A9Q7RTY1 509 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SLC36A1Q7Z2H8 476 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 PIGWQ7Z7B1 504 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 ERI1Q8IV48 349 aaKnown RBP8.84□□□□□ -0.99
CAPN3-204ENST00000356316 TMEM86BQ8N661 226 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 CSNK2A3Q8NEV1 391 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 OR8D4Q8NGM9 314 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 OR2T29Q8NH02 315 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 OR4Q3Q8NH05 313 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 TEX47Q8TBZ9 253 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SSMEM1Q8WWF3 244 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 ST8SIA4Q92187 359 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 LHX4Q969G2 390 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SPSB4Q96A44 273 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 SGK3Q96BR1 496 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 REEP6Q96HR9 211 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 PGAM5Q96HS1 289 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 NSL1Q96IY1 281 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 INTS14Q96SY0 518 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 OR10A2Q9H208 303 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 CNTD2Q9H8S5 307 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 MARCH7Q9H992 704 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 RNPEPL1Q9HAU8 725 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 ARMC1Q9NVT9 282 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 CTSZQ9UBR2 303 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 FAM96BQ9Y3D0 163 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 POMT1Q9Y6A1 747 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 MEGF8Q7Z7M0 2845 aa8.84□□□□□ -0.99
CAPN3-204ENST00000356316 IGHV1-69DA0A0B4J2H0 117 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 C5orf63A6NC05 138 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 ANXA2P2A6NMY6 339 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 GNGT2O14610 69 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 TNFRSF13BO14836 293 aaPredicted RBP8.83□□□□□ -1
CAPN3-204ENST00000356316 ST8SIA5O15466 376 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 WIPF1O43516 503 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 NDUFB3O43676 98 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 LHBP01229 141 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 IGHV1-69P01742 117 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 H2BFMP0C1H6 154 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 CLUP10909 449 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 ATP6V1B2P21281 511 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 GSTT1P30711 240 aa8.83□□□□□ -1
CAPN3-204ENST00000356316 MAGEA2P43356 314 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms