RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PRSS12P56730 875 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 QRFPP83859 136 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 MFAP5Q13361 173 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 TOMM20Q15388 145 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 NCMAPQ5T1S8 102 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 HLA-DQA1Q5Y7H0 255 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 PRSS54Q6PEW0 395 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 RTL10Q7L3V2 364 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ABHD12BQ7Z5M8 362 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-203ENST00000356147 C9orf40Q8IXQ3 194 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 SLC22A24Q8N4F4 322 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 FAM24BQ8N5W8 94 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 NAXEQ8NCW5 288 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 OR13G1Q8NGZ3 307 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 C11orf40Q8WZ69 217 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 THRSPQ92748 146 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 SLAMF6Q96DU3 332 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 RTBDNQ9BSG5 229 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-203ENST00000356147 NMES1Q9C002 83 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 PBOV1Q9GZY1 135 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 VSX1Q9NZR4 365 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF319Q9P2F9 582 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 NPIPA1Q9UND3 350 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 GPR132Q9UNW8 380 aa8.99□□□□□ -0.97
PTPRA-203ENST00000356147 NDUFS6O75380 124 aaKnown RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 PTAFRP25105 342 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 OR3A2P47893 321 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 CX3CR1P49238 355 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 SLC26A5P58743 744 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 IGLV3-21P80748 117 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 SPEM2Q0P670 501 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 SP6Q3SY56 376 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 AWAT1Q58HT5 328 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 TMEM244Q5VVB8 128 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 LINC00469Q8N7U9 141 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 RAB33BQ9H082 229 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 ELL3Q9HB65 397 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 EHFQ9NZC4 300 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 MRPS28Q9Y2Q9 187 aaKnown RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 RFNGQ9Y644 331 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 LOC390937A0A1W2PQ73 354 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 NSA2O95478 260 aaKnown RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 SFT2D2O95562 160 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 CSTBP04080 98 aaKnown RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF20P17024 532 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 ITGA3P26006 1051 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 P2RY4P51582 365 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 CSNK2A1P68400 391 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 IAH1Q2TAA2 248 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 PHF19Q5T6S3 580 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 IL34Q6ZMJ4 242 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 C1QL2Q7Z5L3 287 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF248Q8NDW4 579 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 CSNK2A3Q8NEV1 391 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 OR10S1Q8NGN2 331 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 OR5H2Q8NGV7 314 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 SMCO4Q9NRQ5 59 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF701Q9NV72 531 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 FBXL17Q9UF56 701 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 FRYLO94915 3013 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 A0A1W2PPE2 198 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 TCRBV21S2A2A0A5A6 115 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 TTLL8A6PVC2 850 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 DXOO77932 396 aaKnown RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 PGCP20142 388 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 AKT2P31751 481 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 CEBPGP53567 150 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 HSD17B7P56937 341 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 HGFACQ04756 655 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 NSDHLQ15738 373 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 KLHL24Q6TFL4 600 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 NKAIN3Q8N8D7 197 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 DMBX1Q8NFW5 382 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 GPBAR1Q8TDU6 330 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 ERGIC1Q969X5 290 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 ADIPOR1Q96A54 375 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 LIN37Q96GY3 246 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 HDHD3Q9BSH5 251 aaPredicted RBP8.98□□□□□ -0.97
PTPRA-203ENST00000356147 SLC26A1Q9H2B4 701 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 SPACA1Q9HBV2 294 aa8.98□□□□□ -0.97
PTPRA-203ENST00000356147 IGKV1D-8A0A087WSZ0 117 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 TRBV6-7A0A0A0MS04 114 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 A0A0A6YYH2 397 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 PMS2P1A4D2B8 440 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 A6NJ64 397 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 HSPB2A8KAH6 182 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 A8MVM7 634 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 MS4A18H0YCH9 400 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 XRCC2O43543 280 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 NUDT21O43809 227 aaKnown RBP8.97□□□□□ -0.97
PTPRA-203ENST00000356147 DDAH2O95865 285 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 IFNA4P05014 189 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 FCGR3AP08637 254 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 THEGLP0DJG4 465 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 CRABP1P29762 137 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 BIDP55957 195 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 FOXK1P85037 733 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 HSPB2Q16082 182 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 MS4A18Q3C1V0 323 aa8.97□□□□□ -0.97
PTPRA-203ENST00000356147 MIDNQ504T8 468 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms