RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TMPRSS11DO60235 418 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 OPN1LWP04000 364 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 FBXO45P0C2W1 286 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 HIST1H1CP16403 213 aaKnown RBP14.03□□□□□ -0.16
RTN3-205ENST00000356000 CHRNB4P30926 498 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 ELLP55199 621 aaPredicted RBP14.03□□□□□ -0.16
RTN3-205ENST00000356000 PRPS1P60891 318 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 SPOCK1Q08629 439 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 TMEM241Q24JQ0 296 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 CLEC18BQ6UXF7 455 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 P4HA3Q7Z4N8 544 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 HOGA1Q86XE5 327 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 MRPL41Q8IXM3 137 aaKnown RBP14.03□□□□□ -0.16
RTN3-205ENST00000356000 GBGT1Q8N5D6 347 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 APCDD1LQ8NCL9 501 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 OR2L3Q8NG85 312 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 OR10AC1Q8NH08 325 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 HAS2Q92819 552 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.02□□□□□ -0.16
RTN3-205ENST00000356000 CLDN34H7C241 214 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 OR10J1P30954 320 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 PTGER1P34995 402 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 APOBEC1P41238 236 aaKnown RBP14.02□□□□□ -0.16
RTN3-205ENST00000356000 TFPI2P48307 235 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 PMS2P11Q13670 270 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 SLC9A3R2Q15599 337 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 VHLLQ6RSH7 139 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 TMEM230Q96A57 120 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 RSPRY1Q96DX4 576 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 ACY3Q96HD9 319 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 TNFRSF13CQ96RJ3 184 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 C20orf144Q9BQM9 153 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 METTL8Q9H825 291 aaKnown RBP14.02□□□□□ -0.16
RTN3-205ENST00000356000 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.02□□□□□ -0.16
RTN3-205ENST00000356000 GTF2A1LQ9UNN4 478 aa14.02□□□□□ -0.16
RTN3-205ENST00000356000 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.02□□□□□ -0.17
RTN3-205ENST00000356000 FITM1A5D6W6 292 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 SCGB1D1O95968 90 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 IRF1P10914 325 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 TDGF1P13385 188 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 TAF10Q12962 218 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 ANKRD55Q3KP44 614 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 CCDC74BQ96LY2 380 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 TP53RKQ96S44 253 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 SRD5A3Q9H8P0 318 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 GSKIPQ9P0R6 139 aa14.02□□□□□ -0.17
RTN3-205ENST00000356000 ZNF860A6NHJ4 632 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 HRH1P35367 487 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 NOVA1P51513 510 aaKnown RBP14.01□□□□□ -0.17
RTN3-205ENST00000356000 RNF151Q2KHN1 245 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 FAM220AQ7Z4H9 259 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 TMCO2Q7Z6W1 182 aaPredicted RBP14.01□□□□□ -0.17
RTN3-205ENST00000356000 OR56A1Q8NGH5 318 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 OR51A4Q8NGJ6 313 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 OR14L1PQ8NHC6 308 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 ORAOV1Q8WV07 137 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 NMNAT2Q9BZQ4 307 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 B3GAT1Q9P2W7 334 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 NAGKQ9UJ70 344 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 RPH3ALQ9UNE2 315 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 MEMO1Q9Y316 297 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 MED31Q9Y3C7 131 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 ETV2O00321 342 aaPredicted RBP14.01□□□□□ -0.17
RTN3-205ENST00000356000 AK4P27144 223 aaPredicted RBP14.01□□□□□ -0.17
RTN3-205ENST00000356000 GRPRP30550 384 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 ALG10BQ5I7T1 473 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 TPRG1Q6ZUI0 275 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 NKAIN3Q8N8D7 197 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 COX18Q8N8Q8 333 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 AQP3Q92482 292 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 ERGIC1Q969X5 290 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 ALKBH7Q9BT30 221 aaPredicted RBP14.01□□□□□ -0.17
RTN3-205ENST00000356000 COMMD4Q9H0A8 199 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 ADAP2Q9NPF8 381 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 MRM2Q9UI43 246 aaKnown RBP14.01□□□□□ -0.17
RTN3-205ENST00000356000 COL4A3Q01955 1670 aa14.01□□□□□ -0.17
RTN3-205ENST00000356000 CEP290O15078 2479 aa14□□□□□ -0.17
RTN3-205ENST00000356000 SCN10AQ9Y5Y9 1956 aa14□□□□□ -0.17
RTN3-205ENST00000356000 A0A1B0GV50 99 aa14□□□□□ -0.17
RTN3-205ENST00000356000 MBLAC1A4D2B0 266 aaPredicted RBP14□□□□□ -0.17
RTN3-205ENST00000356000 A8MVM7 634 aa14□□□□□ -0.17
RTN3-205ENST00000356000 K7ERQ8 282 aa14□□□□□ -0.17
RTN3-205ENST00000356000 MDKP21741 143 aaPredicted RBP14□□□□□ -0.17
RTN3-205ENST00000356000 RND3P61587 244 aa14□□□□□ -0.17
RTN3-205ENST00000356000 FHL1Q13642 323 aa14□□□□□ -0.17
RTN3-205ENST00000356000 BATFQ16520 125 aa14□□□□□ -0.17
RTN3-205ENST00000356000 LILRA3Q8N6C8 439 aaPredicted RBP14□□□□□ -0.17
RTN3-205ENST00000356000 GVQW1Q8N7I0 195 aa14□□□□□ -0.17
RTN3-205ENST00000356000 OR2AP1Q8NGE2 309 aa14□□□□□ -0.17
RTN3-205ENST00000356000 PRR13Q9NZ81 148 aa14□□□□□ -0.17
RTN3-205ENST00000356000 BORCS7-ASMTA0A0B4J1R7 106 aa14□□□□□ -0.17
RTN3-205ENST00000356000 A0A1B0GTH9 108 aa14□□□□□ -0.17
RTN3-205ENST00000356000 K7N7A8 449 aa14□□□□□ -0.17
RTN3-205ENST00000356000 ABHD16AO95870 558 aa14□□□□□ -0.17
RTN3-205ENST00000356000 HLA-DRB3P79483 266 aa14□□□□□ -0.17
RTN3-205ENST00000356000 OR1Q1Q15612 314 aa14□□□□□ -0.17
RTN3-205ENST00000356000 CXCL17Q6UXB2 119 aa14□□□□□ -0.17
RTN3-205ENST00000356000 TRAPPC6BQ86SZ2 158 aa14□□□□□ -0.17
RTN3-205ENST00000356000 LYG1Q8N1E2 194 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms