RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 BCAT2O15382 392 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-202ENST00000355815 MPC2O95563 127 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF85Q03923 595 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 SP6Q3SY56 376 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 C1orf87Q8N0U7 546 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 OR10AC1Q8NH08 325 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 OPA3Q9H6K4 179 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 FSCN3Q9NQT6 498 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 OPN4Q9UHM6 478 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 AK3Q9UIJ7 227 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 A0A087X0M5 115 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 A0A1B0GX30 115 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 F2RL1P55085 397 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 BIDP55957 195 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 LRRC18Q8N456 261 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 OR5AP2Q8NGF4 316 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 OR51A4Q8NGJ6 313 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 SLC39A9Q9NUM3 307 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 SLCO1C1Q9NYB5 712 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 CBY1Q9Y3M2 126 aa12.65□□□□□ -0.38
SREBF1-202ENST00000355815 ADAP1O75689 374 aa12.65□□□□□ -0.39
SREBF1-202ENST00000355815 MPZL1O95297 269 aa12.65□□□□□ -0.39
SREBF1-202ENST00000355815 ERGP11308 486 aa12.65□□□□□ -0.39
SREBF1-202ENST00000355815 PPP1R1AQ13522 171 aa12.65□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF528Q3MIS6 628 aa12.65□□□□□ -0.39
SREBF1-202ENST00000355815 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.39
SREBF1-202ENST00000355815 OR5V1Q9UGF6 321 aa12.65□□□□□ -0.39
SREBF1-202ENST00000355815 MMP7P09237 267 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-202ENST00000355815 CAPZBP47756 277 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 UEVLDQ8IX04 471 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 FAM71CQ8NEG0 241 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 SGK3Q96BR1 496 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 SLC46A1Q96NT5 459 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 NUDT9Q9BW91 350 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 CHST6Q9GZX3 395 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 PLEKHA3Q9HB20 300 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 UQCC1Q9NVA1 299 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 OSGIN2Q9Y236 505 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 H7BYZ3 331 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 MTCP1P56278 107 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 C9orf135Q5VTT2 229 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 PUSL1Q8N0Z8 303 aaKnown RBP12.64□□□□□ -0.39
SREBF1-202ENST00000355815 STT3BQ8TCJ2 826 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 ADAMTS18Q8TE60 1221 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 MENTQ9BUN1 341 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 RSPO3Q9BXY4 272 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF230Q9UIE0 474 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-202ENST00000355815 TRPM7Q96QT4 1865 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 A0A087WUJ7 227 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF816-ZNF321PA0A0X1KG74 233 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 LOC107986453A0A1B0GWG9 222 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 YIF1AO95070 293 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 ICAM2P13598 275 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 HNF1AP20823 631 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 OTX2P32243 289 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 FMODQ06828 376 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 GUK1Q16774 197 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 PRTGQ2VWP7 1150 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 PLA1AQ53H76 456 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 GPR137Q96N19 417 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 TMEM100Q9NV29 134 aa12.64□□□□□ -0.39
SREBF1-202ENST00000355815 C9J4A7 227 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 JTBO76095 146 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 HLA-HP01893 362 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 LAP3P28838 519 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 CASRP41180 1078 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 HOXA1P49639 335 aaPredicted RBP12.63□□□□□ -0.39
SREBF1-202ENST00000355815 POLR2GP62487 172 aaKnown RBP eCLIP12.63□□□□□ -0.39
SREBF1-202ENST00000355815 SRYQ05066 204 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 CCINQ13939 588 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 C1orf140Q5VVS0 124 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 DND1Q8IYX4 353 aaKnown RBP12.63□□□□□ -0.39
SREBF1-202ENST00000355815 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 VOPP1Q96AW1 172 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 PAPOLGQ9BWT3 736 aaKnown RBP12.63□□□□□ -0.39
SREBF1-202ENST00000355815 OR52A1Q9UKL2 312 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 TRAV34A0A0B4J273 112 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 A0A1W2PPV4 95 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF727A8MUV8 499 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 SCRG1O75711 98 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF728P0DKX0 622 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 MGST1P10620 155 aaKnown RBP12.63□□□□□ -0.39
SREBF1-202ENST00000355815 ABCD3P28288 659 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 SSTP61278 116 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 MFGE8Q08431 387 aaPredicted RBP12.63□□□□□ -0.39
SREBF1-202ENST00000355815 CLEC1AQ8NC01 280 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 OR56B1Q8NGI3 324 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 PHYHIPQ92561 330 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 SLC25A31Q9H0C2 315 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 GHITMQ9H3K2 345 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 C5orf67F2Z3F1 127 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 DFFBO76075 338 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 CST7O76096 145 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 NAGAP17050 411 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 CXCL12P48061 93 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 TAS2R46P59540 309 aa12.63□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF626Q68DY1 528 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms