RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 TERTO14746 1132 aaKnown RBP13.3□□□□□ -0.28
COL17A1-201ENST00000353479 WDR1O75083 606 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 KITLGP21583 273 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 POU4F3Q15319 338 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 PELI1Q96FA3 418 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 ZNF416Q9BWM5 594 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 LIPT2A6NK58 231 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 FABP7O15540 132 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 EIF2S3P41091 472 aaKnown RBP13.3□□□□□ -0.28
COL17A1-201ENST00000353479 CCDC71Q8IV32 467 aaPredicted RBP13.3□□□□□ -0.28
COL17A1-201ENST00000353479 TMEM217Q8N7C4 229 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 OR10X1Q8NGY0 326 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 ST7LQ8TDW4 575 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 KCNJ8Q15842 424 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 ETFDHQ16134 617 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 SMIM21Q3B7S5 101 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 OR2B11Q5JQS5 317 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 OR10R2Q8NGX6 335 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 MYOFQ9NZM1 2061 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 A0A1B0GTH9 108 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 CCSO14618 274 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 GP1BAP07359 652 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 ATPAF1Q5TC12 328 aaPredicted RBP13.3□□□□□ -0.28
COL17A1-201ENST00000353479 RHOUQ7L0Q8 258 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 ADGRG3Q86Y34 549 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 ASB10Q8WXI3 467 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 MRPS18BQ9Y676 258 aaKnown RBP13.3□□□□□ -0.28
COL17A1-201ENST00000353479 TRAV1-2A0A0B4J238 106 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 CNIH1O95406 144 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 EVX1P49640 407 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 LUMP51884 338 aaPredicted RBP13.3□□□□□ -0.28
COL17A1-201ENST00000353479 MLF1P58340 268 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 SLC35G3Q8N808 338 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 SEH1LQ96EE3 360 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 FOXJ3Q9UPW0 622 aa13.3□□□□□ -0.28
COL17A1-201ENST00000353479 ABCD4O14678 606 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 RAB6AP20340 208 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 CSF2RBP32927 897 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 CLINT1Q14677 625 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 TUSC5Q8IXB3 177 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 A0A0D9SG52 128 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 H3BMH7 237 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 GPR12P47775 334 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 BAXQ07812 192 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 RFPL4BQ6ZWI9 263 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 H2BFWTQ7Z2G1 175 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 LSMEM1Q8N8F7 131 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 OR6X1Q8NH79 312 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 PPP1R14DQ9NXH3 145 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 BRWD1Q9NSI6 2320 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 HBG1P69891 147 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 HBG2P69892 147 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 TMEM211Q6ICI0 200 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 FBXL14Q8N1E6 418 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 HRH4Q9H3N8 390 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 RIMS4Q9H426 269 aaPredicted RBP13.29□□□□□ -0.28
COL17A1-201ENST00000353479 CELA2AP08217 269 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 OR2M7Q8NG81 312 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 SUCNR1Q9BXA5 334 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 FN3KRPQ9HA64 309 aa13.29□□□□□ -0.28
COL17A1-201ENST00000353479 OTOFQ9HC10 1997 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 SMLR1H3BR10 107 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 CA6P23280 308 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 RAB11AP62491 216 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 GNB2P62879 340 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 RPS27AP62979 156 aaKnown RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 UBA52P62987 128 aaKnown RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 NLRC3Q7RTR2 1065 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 CISD2Q8N5K1 135 aaKnown RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 TECTBQ96PL2 329 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 AUNIPQ9H7T9 357 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 EXOGQ9Y2C4 368 aaKnown RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 ANKRD34BA5PLL1 514 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 ZFPL1O95159 310 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 DEFA4P12838 97 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 DRAXINQ8NBI3 349 aaPredicted RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 OR2M3Q8NG83 312 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 RBMXL1Q96E39 390 aaKnown RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 RAB33BQ9H082 229 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 PLK3Q9H4B4 646 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 TRAPPC4Q9Y296 219 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 POM121CA8CG34 1229 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 TPPPO94811 219 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 GABRA1P14867 456 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 HRH1P35367 487 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 DDOSTP39656 456 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 RAB4BP61018 213 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 INSL4Q14641 139 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 CRIPAKQ8N1N5 446 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 C4orf45Q96LM5 186 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 ZNF436Q9C0F3 470 aaPredicted RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 A0A0U1RQK1 487 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 SLC17A2O00624 439 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 ACTL6AO96019 429 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 LIMS3P0CW19 117 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 LIMS4P0CW20 117 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 ZNF674Q2M3X9 581 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 C8orf82Q6P1X6 216 aaPredicted RBP13.28□□□□□ -0.28
COL17A1-201ENST00000353479 SSX9Q7RTT3 188 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms