RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 ANKRD9Q96BM1 317 aaPredicted RBP9.41□□□□□ -0.9
SMG7-201ENST00000347615 GNRHR2Q96P88 292 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 MMACHCQ9Y4U1 282 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 RRADP55042 308 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 PLGLAQ15195 96 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 OR13C8Q8NGS7 320 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 SLC17A2O00624 439 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 AADACP22760 399 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 RAB32Q13637 225 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 LGI3Q8N145 548 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 CLRN3Q8NCR9 226 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 OR8B4Q96RC9 309 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 HS3ST3A1Q9Y663 406 aa9.41□□□□□ -0.9
SMG7-201ENST00000347615 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 EIF4E2O60573 245 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 MGST1P10620 155 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 GABRG2P18507 467 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 APOBEC1P41238 236 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 RNF4P78317 190 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 TLE4Q04727 773 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 PDLIM3Q53GG5 364 aaPredicted RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 THNSL2Q86YJ6 484 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 GRAMD2AQ8IUY3 354 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 SLC38A9Q8NBW4 561 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 NT5CQ8TCD5 201 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 DEFB127Q9H1M4 99 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 ZNF576Q9H609 170 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 EVA1AQ9H8M9 152 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 GNG12Q9UBI6 72 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 KLHDC2Q9Y2U9 406 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 MMP24Q9Y5R2 645 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 ZGLP1P0C6A0 271 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 PEBP1P30086 187 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 ARL3P36405 182 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 RBP2P50120 134 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 Q5BKY6 102 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 MANEAQ5SRI9 462 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 CXorf67Q86X51 503 aaPredicted RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 EXD3Q8N9H8 876 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 NXF2Q9GZY0 626 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 RCL1Q9Y2P8 373 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 AGFG1P52594 562 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 PMP22Q01453 160 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 ZNF239Q16600 458 aaKnown RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 DMKNQ6E0U4 476 aaPredicted RBP9.4□□□□□ -0.9
SMG7-201ENST00000347615 LRP11Q86VZ4 500 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 OR5AP2Q8NGF4 316 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 C10orf90Q96M02 699 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 FAAP24Q9BTP7 215 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 TMEM100Q9NV29 134 aa9.4□□□□□ -0.9
SMG7-201ENST00000347615 SIPA1L1O43166 1804 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 CXCL13O43927 109 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 TIMM8AO60220 97 aaPredicted RBP9.4□□□□□ -0.91
SMG7-201ENST00000347615 ZIC2O95409 532 aaPredicted RBP9.4□□□□□ -0.91
SMG7-201ENST00000347615 IRF2P14316 349 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 TMEM11P17152 192 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 NFYBP25208 207 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 HAAOP46952 286 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.91
SMG7-201ENST00000347615 MIDNQ504T8 468 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 SLC25A26Q70HW3 274 aa9.4□□□□□ -0.91
SMG7-201ENST00000347615 ZNF638Q14966 1978 aaKnown RBP9.4□□□□□ -0.91
SMG7-201ENST00000347615 ST8SIA3O43173 380 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 ACTL6BO94805 426 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 WNT11O96014 354 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 RAB4AP20338 218 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 SPINK9Q5DT21 86 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 MESTQ5EB52 335 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 ZNF626Q68DY1 528 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 MAML2Q8IZL2 1156 aaPredicted RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 ADAD2Q8NCV1 583 aaKnown RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 OR10G3Q8NGC4 313 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 OR6K3Q8NGY3 331 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 WDR34Q96EX3 536 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 FAM103A1Q9BTL3 118 aaKnown RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 ST3GAL6Q9Y274 331 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 TRIM64BA6NI03 449 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 C4orf51C9J302 202 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 TNFRSF10CO14798 259 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 NANOS3P60323 173 aaKnown RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 GRB2P62993 217 aaKnown RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 PSG6Q00889 435 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 SLCO1B1Q9Y6L6 691 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 ANKRD20A5PA0PJZ0 165 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 PRSS44E7EML9 344 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 CHRM2P08172 466 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 CD27P26842 260 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 HOXC8P31273 242 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 LIMK1P53667 647 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 PWWP2BQ6NUJ5 590 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 LRFN5Q96NI6 719 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 PIGQQ9BRB3 760 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 ELF5Q9UKW6 265 aaPredicted RBP9.39□□□□□ -0.91
SMG7-201ENST00000347615 MMP17Q9ULZ9 603 aa9.39□□□□□ -0.91
SMG7-201ENST00000347615 LSM2Q9Y333 95 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms