RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IGHV3-64DA0A0J9YX35 117 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 TMEM269A0A1B0GVZ9 245 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 SNTNA6NMZ2 147 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 J3QLI3 93 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 PLPP2O43688 288 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 CYB5R3P00387 301 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 DCTDP32321 178 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 THBS2P35442 1172 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 GSK3AP49840 483 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 FAM3AP98173 230 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 IL5RAQ01344 420 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 SLC35F2Q8IXU6 374 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 ZNF679Q8IYX0 411 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 SGK3Q96BR1 496 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 HIST1H2AAQ96QV6 131 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 PKP2Q99959 881 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 MICU1Q9BPX6 476 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 C9orf16Q9BUW7 83 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 PAPOLGQ9BWT3 736 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 RNF7Q9UBF6 113 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 METRNQ9UJH8 293 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 TANC2Q9HCD6 1990 aa13.28□□□□□ -0.28
TSPAN4-201ENST00000346501 hCG_1807616A0A1W2PRN6 198 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 CCDC182A6NF36 153 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 FSTL3O95633 263 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 GRPP07492 148 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 RPS2P15880 293 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 LCN2P80188 198 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 MAB21L1Q13394 359 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 ZMYND11Q15326 602 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 AADACL4Q5VUY2 407 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 LIPNQ5VXI9 398 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 Q8TCH9 128 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 TRUB1Q8WWH5 349 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 OR8B4Q96RC9 309 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 SIGLEC11Q96RL6 698 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 DCAF16Q9NXF7 216 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 HAO2Q9NYQ3 351 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 OR5V1Q9UGF6 321 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 GTF2A1LQ9UNN4 478 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 LRCH1Q9Y2L9 728 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 MPC1Q9Y5U8 109 aa13.27□□□□□ -0.29
TSPAN4-201ENST00000346501 hCG_38984A0A1B0GV85 526 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 KIAA1324LA8MWY0 1029 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 M0R129 80 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 EI24O14681 340 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 FAM20BO75063 409 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 MTRF1O75570 445 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 ATP6V1B1P15313 513 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 EPHA2P29317 976 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 MAP2K3P46734 347 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 ALDH3A2P51648 485 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 HCCSP53701 268 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 CXCR4P61073 352 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 ROM1Q03395 351 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 TMED1Q13445 227 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 PRAMEF6Q5VXH4 476 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 ZNF322Q6U7Q0 402 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 PRSS45Q7RTY3 260 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 THAP5Q7Z6K1 395 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 OR8B3Q8NGG8 313 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 OR51G2Q8NGK0 314 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 NEIL1Q96FI4 390 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 OR8B2Q96RD0 313 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 RTL8AQ9BWD3 113 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 MOB1AQ9H8S9 216 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 CLN6Q9NWW5 311 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 USE1Q9NZ43 259 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.26□□□□□ -0.296e-6■■■■□ 26
TSPAN4-201ENST00000346501 KLHDC2Q9Y2U9 406 aa13.26□□□□□ -0.29
TSPAN4-201ENST00000346501 TRAV38-1A0A0B4J264 116 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 PPIAL4CA0A0B4J2A2 164 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 C5orf63A6NC05 138 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 CEACAM18A8MTB9 384 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 PSMD9O00233 223 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 NDUFA2O43678 99 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 ALPLP05186 524 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 KRT8P05787 483 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 OR2T7P0C7T2 308 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 HTR1FP30939 366 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 GNB2P62879 340 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 EFNB1P98172 346 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 EGR3Q06889 387 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 OR8B8Q15620 311 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 BCDIN3DQ7Z5W3 292 aaKnown RBP13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 BOLLQ8N9W6 283 aaKnown RBP13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 OR2T27Q8NH04 317 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 TMEM158Q8WZ71 300 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 EME1Q96AY2 570 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 MYCBPQ99417 103 aaPredicted RBP13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 MRI1Q9BV20 369 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 C7orf69Q9H7B7 122 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 TMEM165Q9HC07 324 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 S100A14Q9HCY8 104 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 C1orf123Q9NWV4 160 aa13.25□□□□□ -0.29
TSPAN4-201ENST00000346501 A0A0U1RQV5 110 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 LOC110117498-PIK3R3F6TDL0 507 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 H3BNX3 289 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 ZNF205O95201 554 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 BAG2O95816 211 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms