RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 KIR2DS1A0A191URI9 304 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 ADAM20O43506 726 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 XRCC2O43543 280 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 PLATP00750 562 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 H2BFMP0C1H6 154 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 IGHV4-38-2P0DP08 117 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 GRK5P34947 590 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 KLHL12Q53G59 568 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 TEX30Q5JUR7 227 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 CD276Q5ZPR3 534 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 WDR25Q64LD2 544 aaPredicted RBP10.35□□□□□ -0.75
SGCA-202ENST00000344627 TREML4Q6UXN2 200 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 FAM57BQ71RH2 274 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 SHFQ7M4L6 423 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 DPY19L4Q7Z388 723 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 SPATA24Q86W54 205 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.35□□□□□ -0.75
SGCA-202ENST00000344627 SPERTQ8NA61 448 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 PLPP7Q8NBV4 271 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 REEP6Q96HR9 211 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 PGAM5Q96HS1 289 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 TOR3AQ9H497 397 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 OPA3Q9H6K4 179 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 C14orf119Q9NWQ9 140 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 ERVK-18Q9QC07 812 aa10.35□□□□□ -0.75
SGCA-202ENST00000344627 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 PRR23D1E9PI22 279 aaPredicted RBP10.34□□□□□ -0.75
SGCA-202ENST00000344627 LGALS8O00214 317 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 PHYHO14832 338 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 GYG2O15488 501 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 NDUFA2O43678 99 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 GLCEO94923 617 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 APOC1P02654 83 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 GYPAP02724 150 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 CRYBA1P05813 215 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 PRR23D2P0DMB1 279 aaPredicted RBP10.34□□□□□ -0.75
SGCA-202ENST00000344627 ANOS1P23352 680 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 OTX1P32242 354 aaPredicted RBP10.34□□□□□ -0.75
SGCA-202ENST00000344627 DDOSTP39656 456 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 ZNF121P58317 390 aaPredicted RBP10.34□□□□□ -0.75
SGCA-202ENST00000344627 FGF12P61328 243 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 PAX2Q02962 417 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 POU4F2Q12837 409 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 GINS1Q14691 196 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 SLC9A3R2Q15599 337 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 PCK2Q16822 640 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 PLBD1Q6P4A8 553 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 ZNF826PQ6ZT77 177 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 ADGRG5Q8IZF4 528 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 THEM6Q8WUY1 208 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 CANT1Q8WVQ1 401 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 FAM71F1Q96KD3 344 aaPredicted RBP10.34□□□□□ -0.75
SGCA-202ENST00000344627 ABHD6Q9BV23 337 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 OR10A2Q9H208 303 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 C1orf21Q9H246 121 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 RASSF4Q9H2L5 321 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
SGCA-202ENST00000344627 SOX21Q9Y651 276 aaPredicted RBP10.34□□□□□ -0.75
SGCA-202ENST00000344627 IGHV3OR15-7A0A075B7D8 119 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 TRAV40A0A0B4J280 105 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 OOEPA6NGQ2 149 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 AQP12BA6NM10 295 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 ACOT8O14734 319 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
SGCA-202ENST00000344627 HMGN1P05114 100 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 PRKACGP22612 351 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 GNALP38405 381 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 RPS7P62081 194 aaKnown RBP10.33□□□□□ -0.76
SGCA-202ENST00000344627 FAM3AP98173 230 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 GK3PQ14409 553 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 LINC01590Q5TEZ4 76 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 GPR157Q5UAW9 335 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 CD300LDQ6UXZ3 194 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 SLC16A9Q7RTY1 509 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 TRPM8Q7Z2W7 1104 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 TMEM179BQ7Z7N9 219 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 AQP12AQ8IXF9 295 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 OR4F5Q8NH21 305 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 DACT3Q96B18 629 aaPredicted RBP10.33□□□□□ -0.76
SGCA-202ENST00000344627 TMIGD2Q96BF3 282 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 SGK3Q96BR1 496 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 DMRTB1Q96MA1 342 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 ZNF48Q96MX3 618 aaPredicted RBP10.33□□□□□ -0.76
SGCA-202ENST00000344627 PCGF1Q9BSM1 259 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 TEX12Q9BXU0 123 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 YY1AP1Q9H869 796 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 BEX1Q9HBH7 125 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 POMT1Q9Y6A1 747 aa10.33□□□□□ -0.76
SGCA-202ENST00000344627 SRRM5B3KS81 715 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 P2RY10O00398 339 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 SELENOFO60613 162 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 OSMP13725 252 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 CFL1P23528 166 aaKnown RBP10.32□□□□□ -0.76
SGCA-202ENST00000344627 NAA10P41227 235 aaPredicted RBP10.32□□□□□ -0.76
SGCA-202ENST00000344627 GMFBP60983 142 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 FLOT2Q14254 428 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 PDCD1Q15116 288 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 BRD3OSQ6XYD6 125 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 ZNF841Q6ZN19 808 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms