RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 C1QL2Q7Z5L3 287 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 KRT77Q7Z794 578 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 AMIGO2Q86SJ2 522 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 CSNK2A3Q8NEV1 391 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 NANPQ8TBE9 248 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 LRTOMTQ8WZ04 291 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 SGK3Q96BR1 496 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 TMEM165Q9HC07 324 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 H2AFY2Q9P0M6 372 aaPredicted RBP13.49□□□□□ -0.25
ATG4B-201ENST00000344376 RNF7Q9UBF6 113 aa13.49□□□□□ -0.25
ATG4B-201ENST00000344376 A8MXK9 166 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 MITFO75030 526 aaPredicted RBP13.48□□□□□ -0.25
ATG4B-201ENST00000344376 PTBP3O95758 552 aaKnown RBP13.48□□□□□ -0.25
ATG4B-201ENST00000344376 GNALP38405 381 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 PSMA6P60900 246 aaKnown RBP13.48□□□□□ -0.25
ATG4B-201ENST00000344376 KCNJ8Q15842 424 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 KDM4DQ6B0I6 523 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 PRSS45Q7RTY3 260 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 PHC2Q8IXK0 858 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 DVL3Q92997 716 aaPredicted RBP13.48□□□□□ -0.25
ATG4B-201ENST00000344376 CNN2Q99439 309 aaKnown RBP13.48□□□□□ -0.25
ATG4B-201ENST00000344376 TEAD3Q99594 435 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 POLR3KQ9Y2Y1 108 aaPredicted RBP13.48□□□□□ -0.25
ATG4B-201ENST00000344376 TMEM14AQ9Y6G1 99 aa13.48□□□□□ -0.25
ATG4B-201ENST00000344376 hCG_38984A0A1B0GV85 526 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 A6NLC8 198 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 PRKYO43930 277 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 MRPL3P09001 348 aaKnown RBP13.47□□□□□ -0.25
ATG4B-201ENST00000344376 ALOX5APP20292 161 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 EPHA1P21709 976 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 GSK3AP49840 483 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 ACTR3P61158 418 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 SEC61A1P61619 476 aaKnown RBP13.47□□□□□ -0.25
ATG4B-201ENST00000344376 GNB2P62879 340 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 MPPED2Q15777 294 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 SLX4IPQ5VYV7 408 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 LRRN1Q6UXK5 716 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 OR8B3Q8NGG8 313 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 ZNF418Q8TF45 676 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-201ENST00000344376 STMN2Q93045 179 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-201ENST00000344376 CENPNQ96H22 339 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-201ENST00000344376 OR8B2Q96RD0 313 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 TMEM246Q9BRR3 403 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 MRI1Q9BV20 369 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 SSBP3Q9BWW4 388 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-201ENST00000344376 MROQ9BYG7 248 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 TRIM36Q9NQ86 728 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 ZNF391Q9UJN7 358 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 KLHDC2Q9Y2U9 406 aa13.47□□□□□ -0.25
ATG4B-201ENST00000344376 A0A0A6YYJ9 748 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 CCDC182A6NF36 153 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 SLC22A31A6NKX4 558 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 ZAR1LA6NP61 321 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 AVPP01185 164 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 GRPP07492 148 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 WNT2P09544 360 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 KPNB1Q14974 876 aaKnown RBP13.46□□□□□ -0.25
ATG4B-201ENST00000344376 KRTAP24-1Q3LI83 254 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 FAM201AQ5SY85 155 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 DEGS2Q6QHC5 323 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 DCDC5Q6ZRR9 648 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 C1orf229Q6ZS94 237 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-201ENST00000344376 ASB17Q8WXJ9 295 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 PAPOLGQ9BWT3 736 aaKnown RBP13.46□□□□□ -0.25
ATG4B-201ENST00000344376 SEMA6AQ9H2E6 1030 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 C1orf123Q9NWV4 160 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 LRP12Q9Y561 859 aa13.46□□□□□ -0.25
ATG4B-201ENST00000344376 hCG_1807616A0A1W2PRN6 198 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ANXA2P2A6NMY6 339 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ZNF12P17014 697 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ADRA2CP18825 462 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 PITPNBP48739 271 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ZNF154Q13106 437 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 C12orf73Q69YU5 71 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 BTNL3Q6UXE8 466 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 MEPCEQ7L2J0 689 aaKnown RBP13.45□□□□□ -0.26
ATG4B-201ENST00000344376 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 TCEANCQ8N8B7 351 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 BOLLQ8N9W6 283 aaKnown RBP13.45□□□□□ -0.26
ATG4B-201ENST00000344376 TMEM163Q8TC26 289 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 MYCBPQ99417 103 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-201ENST00000344376 OSBPL10Q9BXB5 764 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ABCB9Q9NP78 766 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 MMP26Q9NRE1 261 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 OAZ3Q9UMX2 235 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 AUP1Q9Y679 476 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 DNHD1Q96M86 4753 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ACOD1A6NK06 481 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 LGALS8O00214 317 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 PHYHO14832 338 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ZNF254O75437 659 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
ATG4B-201ENST00000344376 IL5RAQ01344 420 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 OR8B8Q15620 311 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ZNF829Q3KNS6 432 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-201ENST00000344376 ARMCX4Q5H9R4 360 aa13.45□□□□□ -0.26
ATG4B-201ENST00000344376 DEFB108BQ8NET1 73 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms