RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 HLA-DPB1P04440 258 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 DAOP14920 347 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 AGTR1P30556 359 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PPICP45877 212 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 MVDP53602 400 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 DSCR4P56555 118 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 RPS4XP62701 263 aaKnown RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ACSM1Q08AH1 577 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ADIPOQQ15848 244 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM177Q53S58 311 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 C12orf73Q69YU5 71 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PIANPQ8IYJ0 282 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM251Q8N6I4 163 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF485Q8NCK3 441 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 OR4F15Q8NGB8 312 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PIGXQ8TBF5 258 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ADIPOR1Q96A54 375 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM45BQ96B21 275 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 MS4A6EQ96DS6 147 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 GAL3ST4Q96RP7 486 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TSSK6Q9BXA6 273 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 MS4A8Q9BY19 250 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SLITRK2Q9H156 845 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 RERGLQ9H628 205 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 MRPS18AQ9NVS2 196 aaKnown RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ASIC5Q9NY37 505 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TRPC4Q9UBN4 977 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 YLPM1P49750 1951 aaKnown RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 LRRN3E7EW58 273 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SULT2B1O00204 365 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ARPC1BO15143 372 aaKnown RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 CYTIPO60759 359 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 OR2F2O95006 317 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TACSTD2P09758 323 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 NR2F6P10588 404 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 COX5AP20674 150 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 CHI3L1P36222 383 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 LUMP51884 338 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PJVKQ0ZLH3 352 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 OR2F1Q13607 317 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SPANXN4Q5MJ08 99 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 HIST2H3PS2Q5TEC6 136 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 C11orf71Q6IPW1 123 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ULK3Q6PHR2 472 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SLCO4C1Q6ZQN7 724 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 C9orf139Q6ZV77 190 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SEM1Q6ZVN7 128 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 CD163Q86VB7 1156 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 MMP21Q8N119 569 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SAMD12Q8N8I0 201 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 DUSP19Q8WTR2 217 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 MOAP1Q96BY2 351 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 RRNAD1Q96FB5 475 aaKnown RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SMIM8Q96KF7 97 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 YPEL4Q96NS1 127 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 S100A13Q99584 98 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 EGFL8Q99944 293 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ASB6Q9NWX5 421 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 SLC2A6Q9UGQ3 507 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PCTPQ9UKL6 214 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TRAV14DV4A0A0A6YYC5 116 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 KANTRA0A1W2PQU2 76 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 RNF222A6NCQ9 220 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF726A6NNF4 738 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 GABRPO00591 440 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 SLC16A8O95907 504 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 OPN1MWP04001 364 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 SFTA3P0C7M3 94 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 OPN1MW2P0DN77 364 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 OPN1MW3P0DN78 364 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 ADRA2CP18825 462 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 FGF7P21781 194 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 HMGA2P52926 109 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 SLC16A1P53985 500 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 DVL1P1P54792 670 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-202ENST00000343599 RAB8AP61006 207 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 VEZF1Q14119 521 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 KIAA0141Q14154 515 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-202ENST00000343599 HMGN3Q15651 99 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.43□□□□□ -1.38
ZNF540-202ENST00000343599 IDNKQ5T6J7 187 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 H1FNTQ75WM6 255 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF664Q8N3J9 261 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF283Q8N7M2 679 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 RNASE8Q8TDE3 154 aaKnown RBP6.43□□□□□ -1.38
ZNF540-202ENST00000343599 MRGPRDQ8TDS7 321 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 OR52E6Q96RD3 313 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF382Q96SR6 550 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 TRIM2Q9C040 744 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM27Q9HBJ8 222 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 NOX3Q9HBY0 568 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 HRASLSQ9HDD0 168 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 KRCC1Q9NPI7 259 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-202ENST00000343599 NRIP3Q9NQ35 241 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 PRTFDC1Q9NRG1 225 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 TMED3Q9Y3Q3 217 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 CCL27Q9Y4X3 112 aa6.43□□□□□ -1.38
ZNF540-202ENST00000343599 MDC1Q14676 2089 aaKnown RBP6.43□□□□□ -1.38
ZNF540-202ENST00000343599 A0A0A6YYD5 115 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms