RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 LOC285556D6RIA3 1793 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 SPTBN1Q01082 2364 aaKnown RBP11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 ADAM10O14672 748 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 IFNA17P01571 189 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 P04436 131 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 AFF3P51826 1226 aaKnown RBP11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 ARL6IP1Q15041 203 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 GUCA2BQ16661 112 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 CLEC12BQ2HXU8 276 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 RPL7L1Q6DKI1 246 aaKnown RBP11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 ATRAIDQ6UW56 229 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 PRSS35Q8N3Z0 413 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 OR9K2Q8NGE7 335 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 SFT2D1Q8WV19 159 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 FBXO17Q96EF6 278 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 PADI1Q9ULC6 663 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 TUBAL3A6NHL2 446 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 H3BP45 60 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 FOXS1O43638 330 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 GPR3P46089 330 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 SLC16A13Q7RTY0 426 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 CRIPAKQ8N1N5 446 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 MENTQ9BUN1 341 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 A6NLC8 198 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 OR5H8P0DN80 308 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 IL11P20809 199 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 PLP2Q04941 152 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF273Q14593 569 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 C6orf201Q7Z4U5 140 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 PPP1R3BQ86XI6 285 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 OR6K3Q8NGY3 331 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 SUCNR1Q9BXA5 334 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 ICAM5Q9UMF0 924 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 A0A1W2PPC4 97 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 UPK3AO75631 287 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 NFYBP25208 207 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 EFNA3P52797 238 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 RNF4P78317 190 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 MGAT2Q10469 447 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 TSPO2Q5TGU0 170 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 SLC16A14Q7RTX9 510 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 HSD17B13Q7Z5P4 300 aaPredicted RBP11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 CCDC54Q8NEL0 328 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 RGP1Q92546 391 aaPredicted RBP11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 HAS2Q92819 552 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 SOSTQ9BQB4 213 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 VN1R1Q9GZP7 353 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 SRPK3Q9UPE1 567 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 PRELID3BQ9Y3B1 194 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 WDR90Q96KV7 1748 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 LOC105371267A0A1B0GV96 52 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 A0A1W2PQF6 199 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 FRG2CA6NGY1 282 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 H7C1Q1 480 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 FOLR1P15328 257 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 NQO2P16083 231 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 DUSP1P28562 367 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 KCNJ3P48549 501 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 C4orf17Q53FE4 359 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 CCDC71LQ8N9Z2 235 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 SLC30A7Q8NEW0 376 aa11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 YBX2Q9Y2T7 364 aaKnown RBP11.1□□□□□ -0.63
SNRNP48-201ENST00000342415 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 B3GALNT1O75752 331 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 SFTA3P0C7M3 94 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 PATE4P0C8F1 98 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 NKX6-1P78426 367 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 MYBPHQ13203 477 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 INPP5JQ15735 1006 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ACTBL2Q562R1 376 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 CLEC1AQ8NC01 280 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 OR2AE1Q8NHA4 323 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 NPAS1Q99742 590 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 RSRP1Q9BUV0 290 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF175Q9Y473 711 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 TMEM218A2RU14 115 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 RNASEK-C17orf49H0YIS7 233 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 PIGPP57054 158 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 PGAP1Q75T13 922 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 YRDCQ86U90 279 aaKnown RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 ZFP62Q8NB50 900 aaPredicted RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 TMEM104Q8NE00 496 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 REEP6Q96HR9 211 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 NMNAT2Q9BZQ4 307 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 LDAHQ9H6V9 325 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 MMP24Q9Y5R2 645 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 FLVCR1Q9Y5Y0 555 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 SLC34A2O95436 690 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 NME1P15531 152 aaKnown RBP11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 S100PP25815 95 aa11.09□□□□□ -0.63
SNRNP48-201ENST00000342415 CHATP28329 748 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms