RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 NPSR1Q6W5P4 371 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 MOB3CQ70IA8 216 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 MISPQ8IVT2 679 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 C19orf47Q8N9M1 422 aaKnown RBP11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 ADAMTS18Q8TE60 1221 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 TAAR8Q969N4 342 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 ZNF681Q96N22 645 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 PLEKHA2Q9HB19 425 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 CHRNA9Q9UGM1 479 aa11.25□□□□□ -0.61
SSX2IP-201ENST00000342203 CTLA4P16410 223 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 DEFB133Q30KQ1 61 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 PABPC1L2AQ5JQF8 200 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 PRAMEF20Q5VT98 475 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 CLEC18BQ6UXF7 455 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 TSTD1Q8NFU3 115 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 GPX8Q8TED1 209 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 MRGPRX3Q96LB0 322 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 ZCCHC4Q9H5U6 513 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 POLR2AP24928 1970 aaKnown RBP11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 CDRT15L2A8MXV6 281 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 GPR137BO60478 399 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 C1QL1O75973 258 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 MDKP21741 143 aaPredicted RBP11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 CLDN17P56750 224 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 FAM185AQ8N0U4 392 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 PBOV1Q9GZY1 135 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 LHX9Q9NQ69 397 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 SERGEFQ9UGK8 458 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 WSB1Q9Y6I7 421 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 PDCD1Q15116 288 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 GGNBP1Q5YKI7 109 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 GKN2Q86XP6 184 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 SFTPA1Q8IWL2 248 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 TSLPQ969D9 159 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 MRPL38Q96DV4 380 aaKnown RBP11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 REEP6Q96HR9 211 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 ZBP1Q9H171 429 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 GPR173Q9NS66 373 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 MED12Q93074 2177 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 NKX2-2O95096 273 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 GUSBP08236 651 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 ADRA2CP18825 462 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 DUSP1P28562 367 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 PLCXD3Q63HM9 321 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 DFFBO76075 338 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 EMC4Q5J8M3 183 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 C9orf135Q5VTT2 229 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 OR8G2PQ6IF36 304 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 LRP11Q86VZ4 500 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 ARRDC1Q8N5I2 433 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 PIGLQ9Y2B2 252 aa11.24□□□□□ -0.61
SSX2IP-201ENST00000342203 OR2M5A3KFT3 312 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 SFT2D2O95562 160 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 POLR2GP62487 172 aaKnown RBP eCLIP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 JMJD6Q6NYC1 403 aaPredicted RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 ETV3LQ6ZN32 361 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 SAT2Q96F10 170 aaPredicted RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 TSPAN32Q96QS1 320 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 G3V3Y1 287 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 EPPINO95925 133 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 ONECUT2O95948 504 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 PHF19Q5T6S3 580 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 OR8U1Q8NH10 309 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 THOC3Q96J01 351 aaKnown RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 GCM1Q9NP62 436 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 SUSD2Q9UGT4 822 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 ARID2Q68CP9 1835 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 A0A1W2PNR3 127 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 SLC35A1P78382 337 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 TSPO2Q5TGU0 170 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 BRICD5Q6PL45 260 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 H1FNTQ75WM6 255 aaPredicted RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 C20orf196Q8IYI0 205 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 LIN37Q96GY3 246 aaPredicted RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 GVINP1Q7Z2Y8 2422 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 KIR2DS5A0A0G2JLQ3 304 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 A0A0G2JNG1 304 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 KIR2DS3K7RE56 304 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 RPL29P47914 159 aaKnown RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 RPS4XP62701 263 aaKnown RBP11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 HSF1Q00613 529 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 KIR2DS5Q14953 304 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 SLC25A42Q86VD7 318 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 SLC38A9Q8NBW4 561 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 NINJ1Q92982 152 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 ZNF426Q9BUY5 554 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 TXNIPQ9H3M7 391 aa11.23□□□□□ -0.61
SSX2IP-201ENST00000342203 A0A1W2PPV9 198 aa11.22□□□□□ -0.61
SSX2IP-201ENST00000342203 HRKO00198 91 aa11.22□□□□□ -0.61
SSX2IP-201ENST00000342203 TBPP20226 339 aa11.22□□□□□ -0.61
SSX2IP-201ENST00000342203 HOXC8P31273 242 aa11.22□□□□□ -0.61
SSX2IP-201ENST00000342203 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
SSX2IP-201ENST00000342203 DTWD2Q8NBA8 298 aa11.22□□□□□ -0.61
SSX2IP-201ENST00000342203 SNX22Q96L94 193 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms