RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 B9D1Q9UPM9 204 aa13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 NOP16Q9Y3C1 178 aaKnown RBP13.24□□□□□ -0.29
NECTIN1-202ENST00000340882 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 M0R1W7 72 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 ANGPT2O15123 496 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 GMFBP60983 142 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 ECH1Q13011 328 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 TRAM2Q15035 370 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 DGUOKQ16854 277 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 TMEM95Q3KNT9 176 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 LRRC23Q53EV4 343 aaPredicted RBP13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 STUMQ69YW2 141 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 WDR93Q6P2C0 686 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 MBOAT2Q6ZWT7 520 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 OR6V1Q8N148 313 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 OR56B2PQ8NGI1 322 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 DUS3LQ96G46 650 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 MAP6Q96JE9 813 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 C7orf26Q96N11 449 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 CDCA4Q9BXL8 241 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 WDR13Q9H1Z4 485 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 RNPEPL1Q9HAU8 725 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 ELL3Q9HB65 397 aaPredicted RBP13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 SRA1Q9HD15 236 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 SNTG1Q9NSN8 517 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 SIGLEC7Q9Y286 467 aa13.23□□□□□ -0.29
NECTIN1-202ENST00000340882 DNAH1Q9P2D7 4330 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 STAB2Q8WWQ8 2551 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 M0R135 149 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 BHLHE40O14503 412 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 ANGPTL7O43827 346 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 RAB13P51153 203 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 EGFEM1PQ0D2K5 195 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 AANATQ16613 207 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 RFX4Q33E94 735 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 LRRC10Q5BKY1 277 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 ATPAF1Q5TC12 328 aaPredicted RBP13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 ZNF730Q6ZMV8 503 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 DYNAPQ8N1N2 210 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 OR1M1Q8NGA1 313 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 ZNF799Q96GE5 643 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 FAM46AQ96IP4 442 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 GAFA1Q96PS6 74 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 FNDC11Q9BVV2 318 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 GAR1Q9NY12 217 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 CYB5R1Q9UHQ9 305 aa13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 SF3B6Q9Y3B4 125 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 V9GYY5 206 aaPredicted RBP13.22□□□□□ -0.29
NECTIN1-202ENST00000340882 NDUFB2O95178 105 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 TPTEP56180 551 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 CD83Q01151 205 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 PLA1AQ53H76 456 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 GPR139Q6DWJ6 353 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 PGM2L1Q6PCE3 622 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 DPY19L4Q7Z388 723 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 VTCN1Q7Z7D3 282 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 ADCK1Q86TW2 530 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 TMEM219Q86XT9 240 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 RNF113BQ8IZP6 322 aaKnown RBP13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 OR9Q1Q8NGQ5 310 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 GPX7Q96SL4 187 aaPredicted RBP13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 NKIRAS1Q9NYS0 192 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 ZNF391Q9UJN7 358 aa13.21□□□□□ -0.29
NECTIN1-202ENST00000340882 HUWE1Q7Z6Z7 4374 aaKnown RBP13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 FXYD1O00168 92 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 TXNDC12O95881 172 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 PSKH1P11801 424 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 KDELR2P33947 212 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 RPS27P42677 84 aaKnown RBP13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 SELENOWP63302 87 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 SLC35A2P78381 396 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 TCTEX1D4Q5JR98 221 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 ZNF788Q6ZQV5 615 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 LIAT1Q6ZQX7 453 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 MKXQ8IYA7 352 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 KRTAP17-1Q9BYP8 105 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 MRPL22Q9NWU5 206 aaKnown RBP13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 HAO2Q9NYQ3 351 aa13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 SLC25A10Q9UBX3 287 aaPredicted RBP13.2□□□□□ -0.3
NECTIN1-202ENST00000340882 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 CDIPTO14735 213 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 PF4V1P10720 104 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 SLC2A1P11166 492 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 NDUFB7P17568 137 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 CRABP1P29762 137 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 BLCAPP62952 87 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 LHFPL4Q7Z7J7 247 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 OR2AJ1Q8NGZ0 328 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 OR8S1Q8NH09 359 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 RCC1LQ96I51 464 aaKnown RBP13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 NMNAT3Q96T66 252 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 LYSTQ99698 3801 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms