RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF254O75437 659 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 SRSF10O75494 262 aaKnown RBP12.93□□□□□ -0.34
VAPA-201ENST00000340541 MSMBP08118 114 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 DCTDP32321 178 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 CDC42P60953 191 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 CXCR4P61073 352 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 BTG1P62324 171 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 MPPED2Q15777 294 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 PRAMEF6Q5VXH4 476 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 ZNF322Q6U7Q0 402 aaPredicted RBP12.93□□□□□ -0.34
VAPA-201ENST00000340541 PEG10Q86TG7 708 aaKnown RBP12.93□□□□□ -0.34
VAPA-201ENST00000340541 LRRC28Q86X40 367 aaPredicted RBP12.93□□□□□ -0.34
VAPA-201ENST00000340541 OR51G2Q8NGK0 314 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 FAM81AQ8TBF8 368 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 Q8TCH9 128 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 TRUB1Q8WWH5 349 aaKnown RBP12.93□□□□□ -0.34
VAPA-201ENST00000340541 MNTQ99583 582 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 GAL3ST1Q99999 423 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 MROQ9BYG7 248 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 PPP1R3EQ9H7J1 279 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 LPAR2Q9HBW0 351 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 ORC6Q9Y5N6 252 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 ARHGAP32A7KAX9 2087 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 ISPDA4D126 451 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 CYB5R3P00387 301 aaPredicted RBP12.92□□□□□ -0.34
VAPA-201ENST00000340541 PNPP00491 289 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 CFL1P23528 166 aaKnown RBP12.92□□□□□ -0.34
VAPA-201ENST00000340541 ACKR3P25106 362 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
VAPA-201ENST00000340541 MFGE8Q08431 387 aaPredicted RBP12.92□□□□□ -0.34
VAPA-201ENST00000340541 GFOD2Q3B7J2 385 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 TMEM155Q4W5P6 130 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 SLC25A30Q5SVS4 291 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 SSX6Q7RTT6 188 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 KLBQ86Z14 1044 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 TMEM186Q96B77 213 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 RAB39BQ96DA2 213 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 APOL4Q9BPW4 351 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 MRM2Q9UI43 246 aaKnown RBP12.92□□□□□ -0.34
VAPA-201ENST00000340541 NOP16Q9Y3C1 178 aaKnown RBP12.92□□□□□ -0.34
VAPA-201ENST00000340541 WNK2Q9Y3S1 2297 aa12.92□□□□□ -0.34
VAPA-201ENST00000340541 TMEM269A0A1B0GVZ9 245 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 ACOD1A6NK06 481 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 ZNF670-ZNF695F2Z2N8 137 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 PHYHO14832 338 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 PLPP2O43688 288 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 FAM20BO75063 409 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 APOL3O95236 402 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 FSTL3O95633 263 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 GABRB1P18505 474 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 SNRPGP62308 76 aaKnown RBP12.91□□□□□ -0.34
VAPA-201ENST00000340541 HOXA4Q00056 320 aaPredicted RBP12.91□□□□□ -0.34
VAPA-201ENST00000340541 EGR3Q06889 387 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 SCGB2A2Q13296 93 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 TMED1Q13445 227 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 ZNF684Q5T5D7 378 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 ZBTB49Q6ZSB9 765 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 ZNF771Q7L3S4 317 aaPredicted RBP12.91□□□□□ -0.34
VAPA-201ENST00000340541 WDR86Q86TI4 376 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 GLCCI1Q86VQ1 547 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 OR51F2Q8NH61 342 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 ZFAND2BQ8WV99 257 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 ERGIC1Q969X5 290 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 PPP1R14AQ96A00 147 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 UFSP2Q9NUQ7 469 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 HIF1ANQ9NWT6 349 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 IMPAD1Q9NX62 359 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 UBAP1Q9NZ09 502 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 IKZF2Q9UKS7 526 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 RHBDD3Q9Y3P4 386 aa12.91□□□□□ -0.34
VAPA-201ENST00000340541 A0A0U1RQV5 110 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 ANKRD30BLA7E2S9 258 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 F5H0A9 414 aaPredicted RBP12.9□□□□□ -0.34
VAPA-201ENST00000340541 DLGAP1O14490 977 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 ENTPD6O75354 484 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 ZNF205O95201 554 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 BAG2O95816 211 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 OR2T7P0C7T2 308 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 MDH2P40926 338 aaKnown RBP12.9□□□□□ -0.34
VAPA-201ENST00000340541 RIDAP52758 137 aaKnown RBP12.9□□□□□ -0.34
VAPA-201ENST00000340541 POU4F2Q12837 409 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 OCLNQ16625 522 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 PLEKHG7Q6ZR37 379 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 KRT74Q7RTS7 529 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 SPICQ8N5J4 248 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 SPERTQ8NA61 448 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 CSNK2A3Q8NEV1 391 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 OR2T27Q8NH04 317 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 STMN2Q93045 179 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 RFKQ969G6 155 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 TBX5Q99593 518 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 PBOV1Q9GZY1 135 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 PATZ1Q9HBE1 687 aaKnown RBP12.9□□□□□ -0.34
VAPA-201ENST00000340541 TMEM165Q9HC07 324 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 G6PC2Q9NQR9 355 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms