RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ANKRD33BA6NCL7 494 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 SULT1B1O43704 296 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 CHRM2P08172 466 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 CSF3P09919 207 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 CTXN2P0C2S0 81 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 HTR2AP28223 471 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 CAV3P56539 151 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 OR5D13Q8NGL4 314 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 TIMP4Q99727 224 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 RIF1Q5UIP0 2472 aaKnown RBP11.36□□□□□ -0.59
LIN54-201ENST00000340417 CLDN14O95500 239 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 IGKV1D-16P01601 117 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 OSR2Q8N2R0 312 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
LIN54-201ENST00000340417 POLE4Q9NR33 117 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 GABARAPH6UMI1 98 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 GABARAPO95166 117 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 GAAP10253 952 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 TAF9Q16594 264 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 GAL3ST2Q9H3Q3 398 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 TMEM38BQ9NVV0 291 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 MBD2Q9UBB5 411 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 RNF7Q9UBF6 113 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 CLEC2DQ9UHP7 191 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 PRSS50Q9UI38 385 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 hADV38S2A0JD32 116 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 RAF1P04049 648 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 CRHP06850 196 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 SMIM10L1P0DMW3 83 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 DOC2BQ14184 412 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 SFRP5Q5T4F7 317 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 MRPL14Q6P1L8 145 aaKnown RBP11.35□□□□□ -0.59
LIN54-201ENST00000340417 SMIM10Q96HG1 83 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 ZNF385AQ96PM9 386 aaKnown RBP11.35□□□□□ -0.59
LIN54-201ENST00000340417 AMMECR1Q9Y4X0 333 aaPredicted RBP11.35□□□□□ -0.59
LIN54-201ENST00000340417 SCG5P05408 212 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 UMODP07911 640 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 CEACAM3P40198 252 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 PRRX1P54821 245 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 PLA2G7Q13093 441 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 SYS1Q8N2H4 156 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 STOML3Q8TAV4 291 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 UBE2FQ969M7 185 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 ADIPOR1Q96A54 375 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 ZNF285Q96NJ3 590 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 OR8B4Q96RC9 309 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 SEC16AO15027 2179 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 TMEM30CPA0ZSE6 113 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 ASPDHA6ND91 283 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 MSTNO14793 375 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 OIP5O43482 229 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 ZNF136P52737 540 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 STX12Q86Y82 276 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 OR2H1Q9GZK4 316 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 ZMAT3Q9HA38 289 aaKnown RBP11.35□□□□□ -0.59
LIN54-201ENST00000340417 ETV7Q9Y603 341 aa11.35□□□□□ -0.59
LIN54-201ENST00000340417 LRP5LA4QPB2 252 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 ZNF205O95201 554 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 EPPINO95925 133 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 GNLYP22749 145 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 MTNR1BP49286 362 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 PDLIM4P50479 330 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 NKX6-1P78426 367 aaPredicted RBP11.34□□□□□ -0.59
LIN54-201ENST00000340417 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
LIN54-201ENST00000340417 FAM53CQ9NYF3 392 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 CLN8Q9UBY8 286 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 YIF1AO95070 293 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 OR4A8P0C604 315 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 APEHP13798 732 aaKnown RBP11.34□□□□□ -0.59
LIN54-201ENST00000340417 RNLSQ5VYX0 342 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 THSD4Q6ZMP0 1018 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 LRRC28Q86X40 367 aaPredicted RBP11.34□□□□□ -0.59
LIN54-201ENST00000340417 ARL11Q969Q4 196 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 PERPQ96FX8 193 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 SSX4O60224 188 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 CTLA4P16410 223 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 DLX5P56178 289 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 KRBOX4Q5JUW0 171 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 SFXN4Q6P4A7 337 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 LSMEM1Q8N8F7 131 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 SLC7A6Q92536 515 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 GABARAPL1Q9H0R8 117 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 OR2S2Q9NQN1 319 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 FXYD1O00168 92 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 IFNA10P01566 189 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 IL1AP01583 271 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 FPR2P25090 351 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 GNG10P50151 68 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 CD83Q01151 205 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 C17orf78Q8N4C9 275 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 RBMXL3Q8N7X1 1067 aaKnown RBP11.34□□□□□ -0.59
LIN54-201ENST00000340417 MED30Q96HR3 178 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
LIN54-201ENST00000340417 PLEKHF2Q9H8W4 249 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 ALG5Q9Y673 324 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 NAP1L6A6NFF2 107 aa11.34□□□□□ -0.59
LIN54-201ENST00000340417 H3BMH7 237 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms