RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GCM1Q9NP62 436 aa12.89□□□□□ -0.35
UBE3B-201ENST00000340074 DCAF16Q9NXF7 216 aa12.89□□□□□ -0.35
UBE3B-201ENST00000340074 PPP1R3CQ9UQK1 317 aa12.89□□□□□ -0.35
UBE3B-201ENST00000340074 EXOGQ9Y2C4 368 aaKnown RBP12.89□□□□□ -0.35
UBE3B-201ENST00000340074 R4GMQ9 66 aa12.89□□□□□ -0.35
UBE3B-201ENST00000340074 A0A0U1RQV5 110 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 ANKRD30BLA7E2S9 258 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 RPP14O95059 124 aaKnown RBP12.88□□□□□ -0.35
UBE3B-201ENST00000340074 IL2RGP31785 369 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 ACTC1P68032 377 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 ACTA1P68133 377 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 OR8B8Q15620 311 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 SMN1Q16637 294 aaKnown RBP12.88□□□□□ -0.35
UBE3B-201ENST00000340074 LIPNQ5VXI9 398 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 CNIH3Q8TBE1 160 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 VCXQ9H320 206 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 NUFIP1Q9UHK0 495 aaKnown RBP12.88□□□□□ -0.35
UBE3B-201ENST00000340074 ZNF391Q9UJN7 358 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 GTF2A1LQ9UNN4 478 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
UBE3B-201ENST00000340074 WIPI2Q9Y4P8 454 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 NSD1Q96L73 2696 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-201ENST00000340074 NIPBLQ6KC79 2804 aaeCLIP12.88□□□□□ -0.35
UBE3B-201ENST00000340074 DAPL1A0PJW8 107 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 METTL15A6NJ78 407 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 GMDSO60547 372 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 SULT1C4O75897 302 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 TTRP02766 147 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 ACKR3P25106 362 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 CAPGP40121 348 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 SLC3A1Q07837 685 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 ACBD7Q8N6N7 88 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 SETD9Q8NE22 299 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 ZNF420Q8TAQ5 688 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-201ENST00000340074 OR51E1Q8TCB6 317 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 GNG8Q9UK08 70 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 OR52A1Q9UKL2 312 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 MYRFQ9Y2G1 1151 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 RHBDD3Q9Y3P4 386 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 SNX5Q9Y5X3 404 aa12.88□□□□□ -0.35
UBE3B-201ENST00000340074 DOCK11Q5JSL3 2073 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 H0YAE9 185 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 IGLV3-1P01715 115 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 GNAO1P09471 354 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 IGHV4-31P0DP07 118 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 CD200P41217 278 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 ISL1P61371 349 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 IL18R1Q13478 541 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 BCL2L15Q5TBC7 163 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 ZNF771Q7L3S4 317 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-201ENST00000340074 MOGAT3Q86VF5 341 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 COMMD2Q86X83 199 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 CELF2-AS1Q8N7Q2 184 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 CSNK2A3Q8NEV1 391 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 CLDND2Q8NHS1 167 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 RORBQ92753 470 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 RAB1CQ92928 201 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 TIMD4Q96H15 378 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 FAM71F1Q96KD3 344 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-201ENST00000340074 PAPOLGQ9BWT3 736 aaKnown RBP12.87□□□□□ -0.35
UBE3B-201ENST00000340074 ACOXLQ9NUZ1 547 aa12.87□□□□□ -0.35
UBE3B-201ENST00000340074 RPL36Q9Y3U8 105 aaKnown RBP12.87□□□□□ -0.35
UBE3B-201ENST00000340074 LOC100289279A0A1B0GTE1 492 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 CD5LO43866 347 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 FAM20BO75063 409 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 GATA4P43694 442 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 RAB40BQ12829 278 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 MPPED2Q15777 294 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 CDONQ4KMG0 1287 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 CYB5R2Q6BCY4 276 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 FAM220AQ7Z4H9 259 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 PEG10Q86TG7 708 aaKnown RBP12.86□□□□□ -0.35
UBE3B-201ENST00000340074 LHFPL3Q86UP9 236 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 CATSPERDQ86XM0 798 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 ELMOD2Q8IZ81 293 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 FTMTQ8N4E7 242 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 OR52I1Q8NGK6 324 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 OR8S1Q8NH09 359 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 MRPS18AQ9NVS2 196 aaKnown RBP12.86□□□□□ -0.35
UBE3B-201ENST00000340074 SLC22A13Q9Y226 551 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 NPTNQ9Y639 398 aa12.86□□□□□ -0.35
UBE3B-201ENST00000340074 ZFHX3Q15911 3703 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-201ENST00000340074 TMEM178BH3BS89 294 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 FADS2O95864 444 aaKnown RBP12.85□□□□□ -0.35
UBE3B-201ENST00000340074 CYB5R3P00387 301 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-201ENST00000340074 IGHA1P01876 353 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 GNALP38405 381 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 PSMB10P40306 273 aa12.85□□□□□ -0.35
UBE3B-201ENST00000340074 PMELP40967 661 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms