RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 TUSC3Q13454 348 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 PRSS8Q16651 343 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 LTC4SQ16873 150 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 CDPF1Q6NVV7 123 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 MED25Q71SY5 747 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 LYG1Q8N1E2 194 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF433Q8N7K0 673 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SIGLECL1Q8N7X8 197 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 AMER3Q8N944 861 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 LINC00116Q8NCU8 138 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ZMAT3Q9HA38 289 aaKnown RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 IL21RQ9HBE5 538 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 CISD1Q9NZ45 108 aaKnown RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 LAMP3Q9UQV4 416 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OARD1Q9Y530 152 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 P2RY1P47900 373 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 GPM6AP51674 278 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 TCL1AP56279 114 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF92Q03936 586 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SRSF6Q13247 344 aaKnown RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 EXT1Q16394 746 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM249Q2WGJ8 235 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SLC8B1Q6J4K2 584 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 NOXRED1Q6NXP6 359 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF562Q6V9R5 426 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OR10Q1Q8NGQ4 319 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 FNDC9Q8TBE3 224 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 RAB8BQ92930 207 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SLC6A18Q96N87 628 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 PLEKHJ1Q9NW61 149 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 GPR52Q9Y2T5 361 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 MON2Q7Z3U7 1717 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 TRAV18A0A075B6X5 111 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM272A0A1B0GTI8 110 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 MEIS3P1A6NDR6 274 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 C17orf112F2Z3M2 114 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CD5LO43866 347 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GNG7O60262 68 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FTH1P19P0C7X4 201 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CTSSP25774 331 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 PYCR1P32322 319 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CRYBA4P53673 196 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SIRPAP78324 504 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ADIPOQQ15848 244 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SOWAHAQ2M3V2 549 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 LEG1Q6P5S2 330 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CMTM1Q8IZ96 169 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SIDT2Q8NBJ9 832 aaKnown RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OR4K13Q8NH42 304 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 HPDLQ96IR7 371 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ARHGDIGQ99819 225 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SMG9Q9H0W8 520 aaKnown RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CXorf36Q9H7Y0 433 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 NEUROD4Q9HD90 331 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM140Q9NV12 185 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SLC23A2Q9UGH3 650 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OR2AG2A6NM03 316 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 KLRC4-KLRK1H3BQV0 150 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 EOMESO95936 686 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GLB1P16278 677 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SSTR5P35346 364 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CRMP1Q14194 572 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GNMTQ14749 295 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OR7A5Q15622 319 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SLC10A6Q3KNW5 377 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FAM180AQ6UWF9 173 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CMTM8Q8IZV2 173 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OR51T1Q8NGJ9 327 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GLYATL1Q969I3 302 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FAM46BQ96A09 425 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GABRG3Q99928 467 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CHST8Q9H2A9 424 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SNED1Q8TER0 1413 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CDC14CA4D256 554 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FFAR2O15552 330 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OPN1SWP03999 348 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SRP19P09132 144 aaKnown RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TCN2P20062 427 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GPR12P47775 334 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GPNMBQ14956 572 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CDK5R1Q15078 307 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ACSF3Q4G176 576 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TPTE2P1Q5T6R2 138 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 RPL7L1Q6DKI1 246 aaKnown RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 RTL6Q6ICC9 239 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TCTN3Q6NUS6 607 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 APOBEC3FQ8IUX4 373 aaKnown RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SLC35F2Q8IXU6 374 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CLEC1AQ8NC01 280 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 NDRG1Q92597 394 aaKnown RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 PTX4Q96A99 478 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 STARD4Q96DR4 205 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SMIM19Q96E16 107 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ALG14Q96F25 216 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 LOXL4Q96JB6 756 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 NPY6RQ99463 290 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 C1orf123Q9NWV4 160 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FBXL17Q9UF56 701 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 C19orf67A6NJJ6 358 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TAPBPO15533 448 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms