RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 IGHV3-15A0A0B4J1V0 119 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 PRAMEF26H0Y7S4 382 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF43P17038 809 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 FHITP49789 147 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 F2RL1P55085 397 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 SLC26A5P58743 744 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 IKZF1Q13422 519 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 MOB3CQ70IA8 216 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 SLC22A18ASQ8N1D0 253 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 OR5L1Q8NGL2 311 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 PTPMT1Q8WUK0 201 aaPredicted RBP12.6□□□□□ -0.39
PCDH8-201ENST00000338862 UQCC2Q9BRT2 126 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 SLCO5A1Q9H2Y9 848 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 KCNJ16Q9NPI9 418 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 CD207Q9UJ71 328 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 GVINP1Q7Z2Y8 2422 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 LAMA1P25391 3075 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 TNFSF14O43557 240 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 RRADP55042 308 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 EIF5AP63241 154 aaKnown RBP12.6□□□□□ -0.39
PCDH8-201ENST00000338862 SGCBQ16585 318 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 TAF9Q16594 264 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.6□□□□□ -0.39
PCDH8-201ENST00000338862 UEVLDQ8IX04 471 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 FLVCR1-AS1Q8TAF5 88 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF2Q9BSG1 426 aaPredicted RBP12.6□□□□□ -0.39
PCDH8-201ENST00000338862 HDHD3Q9BSH5 251 aaPredicted RBP12.6□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF160Q9HCG1 818 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 CTSFQ9UBX1 484 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 PCDHGA1Q9Y5H4 931 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 RAB27BO00194 218 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 EFSO43281 561 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 IL33O95760 270 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 LPCAT3Q6P1A2 487 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 SLC25A42Q86VD7 318 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 SGPP2Q8IWX5 399 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 SGK3Q96BR1 496 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 TCTN2Q96GX1 697 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 OR10C1Q96KK4 312 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 DUSP15Q9H1R2 295 aaPredicted RBP12.6□□□□□ -0.39
PCDH8-201ENST00000338862 S1PR5Q9H228 398 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 NKX2-4Q9H2Z4 354 aa12.6□□□□□ -0.39
PCDH8-201ENST00000338862 PET100P0DJ07 73 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 ZBTB25P24278 435 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF304Q9HCX3 659 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 RCL1Q9Y2P8 373 aaKnown RBP12.59□□□□□ -0.39
PCDH8-201ENST00000338862 PLXNA2O75051 1894 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 A0A1W2PPH5 198 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 WRBO00258 174 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 FAHP16930 419 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 RPL12P30050 165 aaKnown RBP12.59□□□□□ -0.39
PCDH8-201ENST00000338862 SLC37A1P57057 533 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF121P58317 390 aaPredicted RBP12.59□□□□□ -0.39
PCDH8-201ENST00000338862 FOXK1P85037 733 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 TMEM128Q5BJH2 165 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 EMC4Q5J8M3 183 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 MYO7BQ6PIF6 2116 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 SLC43A2Q8N370 569 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 MITD1Q8WV92 249 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 TXNDC12O95881 172 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 EN2P19622 333 aaPredicted RBP12.59□□□□□ -0.39
PCDH8-201ENST00000338862 FCARP24071 287 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 C6orf201Q7Z4U5 140 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 CATSPERDQ86XM0 798 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 RAB33BQ9H082 229 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 ESRP2Q9H6T0 727 aaKnown RBP12.59□□□□□ -0.39
PCDH8-201ENST00000338862 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
PCDH8-201ENST00000338862 TPRP12270 2363 aaKnown RBP12.59□□□□□ -0.39
PCDH8-201ENST00000338862 CEP250Q9BV73 2442 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 MBTPS2O43462 519 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 HEXBP07686 556 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 PNLIPRP2P54317 469 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF674Q2M3X9 581 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 LINC00114Q6XXX2 140 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 OR8U1Q8NH10 309 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 DYRK2Q92630 601 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 SCGB3A2Q96PL1 93 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 LAT2Q9GZY6 243 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 SMCO4Q9NRQ5 59 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 RBM7Q9Y580 266 aaKnown RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 FLVCR1Q9Y5Y0 555 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 LINC01387J3KSC0 135 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 LINC00271P0C7V0 271 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 GABRG2P18507 467 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 NDUFA6P56556 154 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 TAS2R31P59538 309 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 DLX2Q07687 328 aaPredicted RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 MIDNQ504T8 468 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 C4orf17Q53FE4 359 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF684Q5T5D7 378 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 TMEM182Q6ZP80 229 aaPredicted RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 H1FNTQ75WM6 255 aaPredicted RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms