RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 RNPEPL1Q9HAU8 725 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 MRPL22Q9NWU5 206 aaKnown RBP9.41□□□□□ -0.9
CSMD2-202ENST00000338325 DNAJB11Q9UBS4 358 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 PRPF19Q9UMS4 504 aaKnown RBP9.41□□□□□ -0.9
CSMD2-202ENST00000338325 FAM32AQ9Y421 112 aaKnown RBP9.41□□□□□ -0.9
CSMD2-202ENST00000338325 MEIOCA2RUB1 952 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 HMGB1P1B2RPK0 211 aaPredicted RBP9.41□□□□□ -0.9
CSMD2-202ENST00000338325 NDUFB3O43676 98 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 ZNF823P16415 610 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 RHCEP18577 417 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 EFNB2P52799 333 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 DLX1P56177 255 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 C1orf122Q6ZSJ8 110 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 WDR86Q86TI4 376 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 C11orf53Q8IXP5 236 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 SDR9C7Q8NEX9 313 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 OR8S1Q8NH09 359 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 C8orf46Q8TAG6 207 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 CFHR4Q92496 578 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 TNFRSF14Q92956 283 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 FAM162AQ96A26 154 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 DCTN5Q9BTE1 182 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 IFT27Q9BW83 186 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 ADA2Q9NZK5 511 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 NDUFAF4Q9P032 175 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 FOXJ3Q9UPW0 622 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 SIGLEC9Q9Y336 463 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 OR6C68A6NDL8 312 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 ANKRD30BLA7E2S9 258 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 H3BUX3 64 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.4□□□□□ -0.91
CSMD2-202ENST00000338325 NME4O00746 187 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 ACOT8O14734 319 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 XRCC2O43543 280 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 NOS3P29474 1203 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 RPS27P42677 84 aaKnown RBP9.4□□□□□ -0.91
CSMD2-202ENST00000338325 KIR2DS4P43632 304 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 GSK3BP49841 420 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 UBE2E1P51965 193 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 IKZF1Q13422 519 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 LRRC10Q5BKY1 277 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 WDR82Q6UXN9 313 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 DPY19L4Q7Z388 723 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 PNKDQ8N490 385 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 KLHDC1Q8N7A1 406 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 C11orf44Q8N8P7 122 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 BEND2Q8NDZ0 799 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 OR1M1Q8NGA1 313 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 OR4C15Q8NGM1 316 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 OR4C13Q8NGP0 309 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 H1FXQ92522 213 aaKnown RBP9.4□□□□□ -0.91
CSMD2-202ENST00000338325 C12orf43Q96C57 262 aaKnown RBP9.4□□□□□ -0.91
CSMD2-202ENST00000338325 DHRS1Q96LJ7 313 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 FUZQ9BT04 418 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 COPS4Q9BT78 406 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 NSRP1Q9H0G5 558 aaKnown RBP9.4□□□□□ -0.91
CSMD2-202ENST00000338325 CAPN7Q9Y6W3 813 aa9.4□□□□□ -0.91
CSMD2-202ENST00000338325 KMT2CQ8NEZ4 4911 aaKnown RBP9.4□□□□□ -0.91
CSMD2-202ENST00000338325 IDH3BO43837 385 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 TIPRLO75663 272 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 NCK1P16333 377 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 DDOSTP39656 456 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 NAA10P41227 235 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-202ENST00000338325 TGM4P49221 684 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 SLC7A2P52569 658 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 LOXL3P58215 753 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 CSNK2BP67870 215 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 ACSM1Q08AH1 577 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 NCR3LG1Q68D85 454 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 STUMQ69YW2 141 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 ZDHHC21Q8IVQ6 265 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 OR52J3Q8NH60 311 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 OR2T6Q8NHC8 308 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 PPP1R35Q8TAP8 253 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 SPSB4Q96A44 273 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 SEH1LQ96EE3 360 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 KCNJ15Q99712 375 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 TOR3AQ9H497 397 aa9.39□□□□□ -0.91
CSMD2-202ENST00000338325 RANBP3Q9H6Z4 567 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-202ENST00000338325 NKX6-3A6NJ46 265 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 M0R1W7 72 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 SLC22A2O15244 555 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 XPNPEP2O43895 674 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 DIRAS1O95057 198 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 SLC2A1P11166 492 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 PSKH1P11801 424 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 SELLP14151 372 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 AMY2BP19961 511 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 PYCR1P32322 319 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 PRKXP51817 358 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSMD2-202ENST00000338325 SF3A3Q12874 501 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSMD2-202ENST00000338325 KRT72Q14CN4 511 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 TAF13Q15543 124 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 LY6EQ16553 131 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 ATPAF1Q5TC12 328 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-202ENST00000338325 DCXRQ7Z4W1 244 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 PROKR2Q8NFJ6 384 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 CLPTM1LQ96KA5 538 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 C7orf34Q96L11 122 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms