RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 OR2M7Q8NG81 312 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 OR6S1Q8NH40 331 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 RADILQ96JH8 1075 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 UTP23Q9BRU9 249 aaKnown RBP11.06□□□□□ -0.64
LIMK1-201ENST00000336180 SELENOIQ9C0D9 397 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 C12orf49Q9H741 205 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 EXO5Q9H790 373 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 ZFP64Q9NPA5 681 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF581Q9P0T4 197 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 NUP50Q9UKX7 468 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 FLVCR1Q9Y5Y0 555 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 CEP295Q9C0D2 2601 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 CIB4A0PJX0 185 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 XRCC3O43542 346 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF17P17021 662 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 IGFBP3P17936 291 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 SRD5A2P31213 254 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 AP2S1P53680 142 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 PSMA6P60900 246 aaKnown RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 RSPO1Q2MKA7 263 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 TMEM123Q8N131 208 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 NAA11Q9BSU3 229 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 ACOT7O00154 380 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 RAB40ALP0C0E4 278 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 UBCP0CG48 685 aaKnown RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 PRSS3P35030 304 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF93P35789 620 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 CCL11P51671 97 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 GLIPR1L1Q6UWM5 242 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 OR11H4Q8NGC9 324 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 RAB40AQ8WXH6 277 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 NABP1Q96AH0 204 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 GINS4Q9BRT9 223 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 OR2B2Q9GZK3 357 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 ANGPTL7O43827 346 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF806P0C7X5 589 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF32P17041 273 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 WT1P19544 449 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-201ENST00000336180 SCRN3Q0VDG4 424 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 BRICD5Q6PL45 260 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 OR2V1Q8NHB1 315 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 TMEM41AQ96HV5 264 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 GPR173Q9NS66 373 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 CA10Q9NS85 328 aa11.05□□□□□ -0.64
LIMK1-201ENST00000336180 A0A087WZY1 265 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 IGKV1-9A0A0C4DH69 117 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 A0A1W2PR80 420 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 ANKRD20A5PA0PJZ0 165 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF205O95201 554 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 HRGP04196 525 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF883P0CG24 379 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 RAB3AP20336 220 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 PSMB1P20618 241 aaKnown RBP11.04□□□□□ -0.64
LIMK1-201ENST00000336180 AKR1D1P51857 326 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 SSTP61278 116 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 C2orf68Q2NKX9 166 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 TSPO2Q5TGU0 170 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF813Q6ZN06 617 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 FAM219AQ8IW50 185 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 TUSC5Q8IXB3 177 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 PAQR4Q8N4S7 273 aaPredicted RBP11.04□□□□□ -0.64
LIMK1-201ENST00000336180 C12orf57Q99622 126 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 PRRG4Q9BZD6 226 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 NELFAQ9H3P2 528 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 METTL17Q9H7H0 456 aaPredicted RBP11.04□□□□□ -0.64
LIMK1-201ENST00000336180 ING3Q9NXR8 418 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 COL27A1Q8IZC6 1860 aaPredicted RBP11.04□□□□□ -0.64
LIMK1-201ENST00000336180 LCATP04180 440 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 VSIG8P0DPA2 414 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 STOMP27105 288 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 HIST3H3Q16695 136 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 GPR137CQ8N3F9 429 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 TMEM251Q8N6I4 163 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 TTTY12Q9BZ98 90 aa11.04□□□□□ -0.64
LIMK1-201ENST00000336180 IGHV3-64DA0A0J9YX35 117 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SOCS1O15524 211 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 EIF1BO60739 113 aaKnown RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 NOS1APO75052 506 aaPredicted RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 CRTAPO75718 401 aaPredicted RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 RPL35P42766 123 aaKnown RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SNU13P55769 128 aaKnown RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 DLX5P56178 289 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 RAC3P60763 192 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ZP1P60852 638 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 TOR2AQ5JU69 321 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 FAM166AQ6J272 317 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 LIN54Q6MZP7 749 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ADGRE4PQ86SQ3 457 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 C20orf196Q8IYI0 205 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 CLEC1AQ8NC01 280 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 OR6M1Q8NGM8 313 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SCMH1Q96GD3 660 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 DDA1Q9BW61 102 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 NPAP1Q9NZP6 1156 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 KLK13Q9UKR3 277 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ING4Q9UNL4 249 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 PIGLQ9Y2B2 252 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ETV7Q9Y603 341 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms