RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ISLRO14498 428 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 KLF7O75840 302 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 NEURL1O76050 574 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 IGHEP01854 428 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 KIR2DS5Q14953 304 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SYPL1Q16563 259 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 LEMD1Q68G75 181 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 FAM26EQ8N5C1 309 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 GPR137Q96N19 417 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ADAT1Q9BUB4 502 aaKnown RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SMG9Q9H0W8 520 aaKnown RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SLAMF8Q9P0V8 285 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 NCKAP5O14513 1909 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 GAGE10A6NGK3 116 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SELENOFO60613 162 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 CTSAP10619 480 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 IAPPP10997 89 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 BCL3P20749 454 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SSR4P51571 173 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 LYSMD4Q5XG99 296 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM116Q8NCL8 245 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 OR8D4Q8NGM9 314 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ARRDC3Q96B67 414 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 POM121L2Q96KW2 1035 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 DCBLD2Q96PD2 775 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ZFP30Q9Y2G7 519 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 NTNG1Q9Y2I2 539 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF98A6NK75 572 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 LDB3O75112 727 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 TEAD1P28347 426 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 PRLHRP49683 370 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 LIMK1P53667 647 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 EDDM3BP56851 147 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 HES4Q9HCC6 221 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 DOCK2Q92608 1830 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 PRAMEF26H0Y7S4 382 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CD46P15529 392 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 HIST1H1BP16401 226 aaKnown RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CLDN17P56750 224 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SEMA3BQ13214 749 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 NPY5RQ15761 445 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 MLF2Q15773 248 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SYS1Q8N2H4 156 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ULBP3Q9BZM4 244 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SPHK2Q9NRA0 654 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CORTO00230 105 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 F2P00734 622 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 KIR2DS2P43631 304 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ISL1P61371 349 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 YOD1Q5VVQ6 348 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 AAED1Q7RTV5 226 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 C10orf126Q8N4M7 172 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 DTD1Q8TEA8 209 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 HDAC8Q9BY41 377 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TAF1P21675 1872 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TSPAN12O95859 305 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 FURINP09958 794 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 NAT2P11245 290 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 OR2B11Q5JQS5 317 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PRSS45Q7RTY3 260 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PLPP6Q8IY26 295 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 GPR61Q9BZJ8 451 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 RCL1Q9Y2P8 373 aaKnown RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CASP8AP2Q9UKL3 1982 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 FAM74A7A6NL05 159 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SIAH2O43255 324 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SMAGPQ0VAQ4 97 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 DOK4Q8TEW6 326 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TTC9Q92623 222 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PIGTQ969N2 578 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 FAM206AQ9NX38 181 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CRXO43186 299 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SP1P08047 785 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 EDDM3AQ14507 147 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 GPNMBQ14956 572 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CST6Q15828 149 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SLC25A43Q8WUT9 341 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TIMD4Q96H15 378 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PDLIM5Q96HC4 596 aaKnown RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 EGLN2Q96KS0 407 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TMED3Q9Y3Q3 217 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PTPRQQ9UMZ3 2332 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ERVS71-1P61550 626 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 IER5LQ5T953 404 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ARFGAP1Q8N6T3 406 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 DUSP18Q8NEJ0 188 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CGGBP1Q9UFW8 167 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PAM16Q9Y3D7 125 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 M0R3E3 92 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 HS3ST1O14792 307 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 HAND1O96004 215 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 HPP00738 406 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 MBPP02686 304 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 FOXB2Q5VYV0 432 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 H1FNTQ75WM6 255 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 LINC00346Q8IVM7 164 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM255BQ8WV15 326 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 DTD2Q96FN9 168 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PRR14LQ5THK1 2151 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms