RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 SCAMP4Q969E2 229 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM56Q96MV1 263 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 UTP23Q9BRU9 249 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 LAT2Q9GZY6 243 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SLAMF8Q9P0V8 285 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 PIPOXQ9P0Z9 390 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CLEC2DQ9UHP7 191 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CRHP06850 196 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CD46P15529 392 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SLC35G1Q2M3R5 365 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 HNRNPA1L2Q32P51 320 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SPRYD7Q5W111 196 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 MRPL38Q96DV4 380 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 POM121L2Q96KW2 1035 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 OCIAD1Q9NX40 245 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 HS3ST2Q9Y278 367 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 HRO43593 1189 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 FGF18O76093 207 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SEC11BP0C7V7 166 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SSX1Q16384 188 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 C2orf27AQ580R0 203 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 LCN15Q6UWW0 184 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ARRDC3Q96B67 414 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ABHD14BQ96IU4 210 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 IL21Q9HBE4 155 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ECM29Q5VYK3 1845 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 UBE2L5PA0A1B0GUS4 154 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 FAM171A2A8MVW0 826 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 UTS2O95399 124 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 HTR1DP28221 377 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CD96P40200 585 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 NNATQ16517 81 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 LINC00303Q3SY05 128 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 LRRC18Q8N456 261 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 STXBP6Q8NFX7 210 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ERGIC1Q969X5 290 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 GKN1Q9NS71 199 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 A0A1B0GWA3 101 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CLEC18AA5D8T8 446 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 KLF7O75840 302 aaPredicted RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CEBPBP17676 345 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 NTSR1P30989 418 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 FAM109BQ6ICB4 259 aaPredicted RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 JMJD6Q6NYC1 403 aaPredicted RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CLEC18CQ8NCF0 446 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 OR51H1Q8NH63 302 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM190Q8WZ59 177 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM231Q9H6L2 316 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 METTL1Q9UBP6 276 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ANKRD20A5PA0PJZ0 165 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 A6NCN8 305 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM210A6NLX4 147 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CLDN18P56856 261 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 RBPJQ06330 500 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF718Q3SXZ3 478 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 GPRIN1Q7Z2K8 1008 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 OR52N4Q8NGI2 321 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 OR2T6Q8NHC8 308 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 FIZ1Q96SL8 496 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CALHM2Q9HA72 323 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ABCA3Q99758 1704 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 H7C1C5 153 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CLEC2LP0C7M8 214 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 RIGQ13278 110 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 HES1Q14469 280 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 PRAMEF20Q5VT98 475 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SLC35E3Q7Z769 313 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ADAMTS17Q8TE56 1095 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 IP6K3Q96PC2 410 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CHRNA10Q9GZZ6 450 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 C5AR2Q9P296 337 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 DLEC1Q9Y238 1755 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 NUP98P52948 1817 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 PRSS37A4D1T9 235 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 POM121BA6NF01 834 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 BSXQ3C1V8 233 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 AMMECR1LQ6DCA0 310 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 MED20Q9H944 212 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 OR5V1Q9UGF6 321 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 LSM2Q9Y333 95 aaKnown RBP5□□□□□ -1.61
PTPRB-202ENST00000334414 WNT6Q9Y6F9 365 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF816-ZNF321PA0A0X1KG74 233 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 C5orf52A6NGY3 159 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 HLA-DQA1P01909 254 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 F13BP05160 661 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 COX6CP09669 75 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 RD3LP0DJH9 198 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 MMP9P14780 707 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 LAIR1Q6GTX8 287 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF687Q8N1G0 1237 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 MRPS24Q96EL2 167 aaKnown RBP5□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM147Q9BVK8 224 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 MAGT1Q9H0U3 335 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 PDLIM7Q9NR12 457 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 C19orf53Q9UNZ5 99 aaPredicted RBP5□□□□□ -1.61
PTPRB-202ENST00000334414 A6NIN4 97 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 PITX3O75364 302 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 YBX1P67809 324 aaKnown RBP5□□□□□ -1.61
PTPRB-202ENST00000334414 FABP5Q01469 135 aa5□□□□□ -1.61
PTPRB-202ENST00000334414 SQSTM1Q13501 440 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms