RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 FAHP16930 419 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 RCVRNP35243 200 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 NKX2-5P52952 324 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-201ENST00000331456 UNC119Q13432 240 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 KCNJ8Q15842 424 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 C3AR1Q16581 482 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 GSG1Q2KHT4 349 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 SNAI3Q3KNW1 292 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 TMEM255AQ5JRV8 349 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 SFRP5Q5T4F7 317 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 IGFL2Q6UWQ7 119 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 PAQR4Q8N4S7 273 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-201ENST00000331456 SEMA6DQ8NFY4 1073 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 SEH1LQ96EE3 360 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 WDYHV1Q96HA8 205 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 REEP6Q96HR9 211 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 SPACA5Q96QH8 159 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 NUDT16L1Q9BRJ7 211 aaKnown RBP12.21□□□□□ -0.45
TRAIP-201ENST00000331456 BEX2Q9BXY8 128 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 TP63Q9H3D4 680 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-201ENST00000331456 GHITMQ9H3K2 345 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 RGCCQ9H4X1 137 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 ATPIF1Q9UII2 106 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 CNTRLQ7Z7A1 2325 aa12.21□□□□□ -0.45
TRAIP-201ENST00000331456 TRAV17A0A0B4J275 112 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 CHRM2P08172 466 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 MMP7P09237 267 aaPredicted RBP12.21□□□□□ -0.46
TRAIP-201ENST00000331456 FCGR2AP12318 317 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.46
TRAIP-201ENST00000331456 PLA2G5P39877 138 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 TAS2R19P59542 299 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 RIPPLY1Q0D2K3 151 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 MAB21L1Q13394 359 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 RNFT1Q5M7Z0 435 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 PLXDC2Q6UX71 529 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 ZNF782Q6ZMW2 699 aaPredicted RBP12.21□□□□□ -0.46
TRAIP-201ENST00000331456 CHST4Q8NCG5 386 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 GIMAP1Q8WWP7 306 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 NOX3Q9HBY0 568 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 GHRLQ9UBU3 117 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 ZNF107Q9UII5 783 aaPredicted RBP12.21□□□□□ -0.46
TRAIP-201ENST00000331456 POU2F3Q9UKI9 436 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 PAIP2BQ9ULR5 123 aaKnown RBP12.21□□□□□ -0.46
TRAIP-201ENST00000331456 PTPRBP23467 1997 aa12.21□□□□□ -0.46
TRAIP-201ENST00000331456 IGKV1-9A0A0C4DH69 117 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 MEIS3P1A6NDR6 274 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 TM4SF5O14894 197 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 WT1P19544 449 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-201ENST00000331456 OR3A4PP47883 348 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 RTP5Q14D33 572 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 KISS1Q15726 138 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 DEFB109BQ30KR1 87 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 MOGAT2Q3SYC2 334 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 PABPC1L2AQ5JQF8 200 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 CD276Q5ZPR3 534 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 FGD2Q7Z6J4 655 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 TMEM229BQ8NBD8 167 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 OR4C16Q8NGL9 310 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 FGFBP3Q8TAT2 258 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 SSC4DQ8WTU2 575 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 ZNF486Q96H40 463 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-201ENST00000331456 FYTTD1Q96QD9 318 aaKnown RBP12.2□□□□□ -0.46
TRAIP-201ENST00000331456 OR10A4Q9H209 315 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 SPRR3Q9UBC9 169 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 ZNF175Q9Y473 711 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 SLC22A20A6NK97 555 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 RAB27BO00194 218 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 ARPC1BO15143 372 aaKnown RBP12.2□□□□□ -0.46
TRAIP-201ENST00000331456 NDUFB6O95139 128 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 CLN3Q13286 438 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 LINC00303Q3SY05 128 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 ZNF260Q3ZCT1 412 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 FAAP20Q6NZ36 180 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 STEAP1BQ6NZ63 245 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 Q6ZTK2 550 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 NOXA1Q86UR1 476 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 OR10R2Q8NGX6 335 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 AQP3Q92482 292 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 CPNE2Q96FN4 548 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-201ENST00000331456 RNF170Q96K19 258 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 S100A13Q99584 98 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 URM1Q9BTM9 101 aaKnown RBP12.2□□□□□ -0.46
TRAIP-201ENST00000331456 CST11Q9H112 138 aa12.2□□□□□ -0.46
TRAIP-201ENST00000331456 XRCC2O43543 280 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 MPIG6BO95866 241 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 CYB5AP00167 134 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 VEGFCP49767 419 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 MRPS15P82914 257 aaKnown RBP12.19□□□□□ -0.46
TRAIP-201ENST00000331456 PMP22Q01453 160 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 HGFACQ04756 655 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 RBMS2Q15434 407 aaKnown RBP12.19□□□□□ -0.46
TRAIP-201ENST00000331456 UBE2V2Q15819 145 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 CDNFQ49AH0 187 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 C9orf135Q5VTT2 229 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 METTL11BQ5VVY1 283 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 GABRG1Q8N1C3 465 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
TRAIP-201ENST00000331456 NPRL2Q8WTW4 380 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms