RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PRRC2BQ5JSZ5 2229 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 NPIPA7E9PJI5 369 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 LEFTY2O00292 366 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 AHSA1O95433 338 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 NPIPA8P0DM63 369 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 AKR1C4P17516 323 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 RPL19P84098 196 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 MFSD9Q8NBP5 474 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF740Q8NDX6 193 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 OR14L1PQ8NHC6 308 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 SCAMP4Q969E2 229 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 SMIM3Q9BZL3 60 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 ZBP1Q9H171 429 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 MRPL22Q9NWU5 206 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 VAX2Q9UIW0 290 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 HS3ST2Q9Y278 367 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 TICRRQ7Z2Z1 1910 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 HSD17B6O14756 317 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 LEFTY1O75610 366 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 LINC00271P0C7V0 271 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 BCKDHBP21953 392 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 CAMLGP49069 296 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 H3F3AP84243 136 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 STAC2Q6ZMT1 411 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 TDHQ8IZJ6 230 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 CYB561A3Q8NBI2 242 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 APCDD1LQ8NCL9 501 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 OR52L1Q8NGH7 329 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 TOMM40LQ969M1 308 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 MRGPRX1Q96LB2 322 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 HIST1H2AAQ96QV6 131 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 GLIPR2Q9H4G4 154 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF430Q9H8G1 570 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 KLHL28Q9NXS3 571 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 NAGKQ9UJ70 344 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 RBM7Q9Y580 266 aaKnown RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 EYSQ5T1H1 3165 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 LOC102724200A0A096LPH7 203 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 ANKUB1A6NFN9 424 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF705FA8MVS1 300 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 BHLHE40O14503 412 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 CST4P01036 141 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF705DP0CH99 300 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF705BP0CI00 300 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 NID1P14543 1247 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 PPP1CCP36873 323 aaKnown RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 CCR5P51681 352 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 PRPS1P60891 318 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 HSF1Q00613 529 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 REEP5Q00765 189 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 TSTA3Q13630 321 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-201ENST00000328923 ANKRD16Q6P6B7 361 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 Q7L0L9 218 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 HSD11B1LQ7Z5J1 315 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 DEFB123Q8N688 67 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 STPG4Q8N801 248 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 GPX8Q8TED1 209 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 CDC6Q99741 560 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 PBDC1Q9BVG4 233 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 DPEP2Q9H4A9 486 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 PDE7BQ9NP56 450 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 CMC2Q9NRP2 79 aa10.57□□□□□ -0.72
SHMT2-201ENST00000328923 AHRRA9YTQ3 701 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 C17orf105B2RV13 164 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 SERPINA2P20848 420 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 LSSP48449 732 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 TDRG1Q3Y452 100 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 HIKESHIQ53FT3 197 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 GDF7Q7Z4P5 450 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 WDFY1Q8IWB7 410 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 OR56A1Q8NGH5 318 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 DNASE2BQ8WZ79 361 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 FGF13Q92913 245 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 GLYATL1Q969I3 302 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 MRGPRFQ96AM1 343 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 TBX15Q96SF7 602 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 OR10A5Q9H207 317 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 OR52D1Q9H346 318 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 ZDHHC6Q9H6R6 413 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 PELI2Q9HAT8 420 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 CDH20Q9HBT6 801 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 PRR13Q9NZ81 148 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF860A6NHJ4 632 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 C22orf46C9J442 243 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 SCDO00767 359 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 ALDH3B1P43353 468 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 ELOCQ15369 112 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 SLC25A26Q70HW3 274 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 SYS1Q8N2H4 156 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 OR51D1Q8NGF3 324 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 OR5L2Q8NGL0 311 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 THRSPQ92748 146 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 TMEM18Q96B42 140 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 CMBLQ96DG6 245 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 OR8B4Q96RC9 309 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 C5AR2Q9P296 337 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 IL19Q9UHD0 177 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 MSRAQ9UJ68 235 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms