RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 NAT6Q93015 286 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 B3GAT1Q9P2W7 334 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 DSCAML1Q8TD84 2053 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 CSN3P07498 182 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SLC6A12P48065 614 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 DCAF7P61962 342 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 ZNF154Q13106 437 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 EGLN1Q9GZT9 426 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 FBXO34Q9NWN3 711 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 WNT11O96014 354 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TRA2BP62995 288 aaKnown RBP7.18□□□□□ -1.26
CIITA-201ENST00000324288 SLC16A12Q6ZSM3 486 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 OR51E1Q8TCB6 317 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 GPR84Q9NQS5 396 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SLC5A6Q9Y289 635 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 A0A1B0GTQ1 180 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TEX50A0A1B0GTY4 177 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 COX7A2P2O60397 106 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 FFAR4Q5NUL3 377 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 RGP1Q92546 391 aaPredicted RBP7.18□□□□□ -1.26
CIITA-201ENST00000324288 CXorf58Q96LI9 332 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TRIB1Q96RU8 372 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SIGLEC5O15389 551 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 CYB561P49447 251 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SIGLEC14Q08ET2 396 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TMEM207Q6UWW9 146 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 GOT1L1Q8NHS2 421 aaPredicted RBP7.18□□□□□ -1.26
CIITA-201ENST00000324288 NPTNQ9Y639 398 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 F11P03951 625 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 ZNF250P15622 560 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SP6Q3SY56 376 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SPINK9Q5DT21 86 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 DHRS13Q6UX07 377 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 OR8A1Q8NGG7 326 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 OR2A1Q8NGT9 310 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 RTN4IP1Q8WWV3 396 aaPredicted RBP7.18□□□□□ -1.26
CIITA-201ENST00000324288 TM4SF18Q96CE8 201 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 P2RY12Q9H244 342 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 PRSS16Q9NQE7 514 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 A0A1W2PNR3 127 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 ZNF385BQ569K4 471 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 NKAIN4Q8IVV8 208 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 ZADH2Q8N4Q0 377 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 ARHGEF39Q8N4T4 335 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SCMH1Q96GD3 660 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 MUTYHQ9UIF7 546 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 POMT2Q9UKY4 750 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SIT1Q9Y3P8 196 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 OR5AL1P0C617 328 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 HLXQ14774 488 aaPredicted RBP7.18□□□□□ -1.26
CIITA-201ENST00000324288 ST3GAL2Q16842 350 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TMEM97Q5BJF2 176 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 NDUFB11Q9NX14 153 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 HSF4Q9ULV5 492 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SLCO1B1Q9Y6L6 691 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 MEIKINA0A087WXM9 373 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 CLEC18AA5D8T8 446 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 JTBO76095 146 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 PCK2Q16822 640 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 CNTN4Q8IWV2 1026 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 CLEC18CQ8NCF0 446 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TMPRSS13Q9BYE2 586 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TMEM202A6NGA9 273 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 H0Y8X5 98 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 GEMIN2O14893 280 aaKnown RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 ADRA1AP35348 466 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 SLC17A1Q14916 467 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 RABEPKQ7Z6M1 372 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 FAM24BQ8N5W8 94 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 EXTL1Q92935 676 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ERGIC1Q969X5 290 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 DUS3LQ96G46 650 aaKnown RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 GABARAPL1Q9H0R8 117 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 GPNMBQ14956 572 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TRNP1Q6NT89 227 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CBLN2Q8IUK8 224 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ETFBKMTQ8IXQ9 262 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CBARPQ8N350 705 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 DUSP18Q8NEJ0 188 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 LCORQ96JN0 433 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 GPX7Q96SL4 187 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 LYRM2Q9NU23 88 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 MIOXQ9UGB7 285 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CYS1Q717R9 158 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 OR52N5Q8NH56 324 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 EPHX3Q9H6B9 360 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 A0A1W2PR80 420 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 E5RGE8 158 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TNFSF11O14788 317 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 MYF5P13349 255 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CCKARP32238 428 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 RRADP55042 308 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TRAF4Q9BUZ4 470 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 BARHL1Q9BZE3 327 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ACER3Q9NUN7 267 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 NSG2Q9Y328 171 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TAPBPO15533 448 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 PLXDC2Q6UX71 529 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ARL6IP6Q8N6S5 226 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms