RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 C9orf170A2RU37 121 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 OR5H14A6NHG9 310 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 GJE1A6NN92 205 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 NMBP08949 121 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 FOLR3P41439 243 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 CBX5P45973 191 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 SUCLG1P53597 346 aaKnown RBP19.69■□□□□ 0.74
PNKP-201ENST00000322344 RAC1P63000 192 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 PPP1R1AQ13522 171 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 SLC22A6Q4U2R8 563 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 RGS7BPQ6MZT1 257 aaPredicted RBP19.69■□□□□ 0.74
PNKP-201ENST00000322344 TMEM123Q8N131 208 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 ARMC10Q8N2F6 343 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 TMEM104Q8NE00 496 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 DHRS9Q9BPW9 319 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 PDCD10Q9BUL8 212 aa19.69■□□□□ 0.74
PNKP-201ENST00000322344 PHF3Q92576 2039 aaKnown RBP19.69■□□□□ 0.74
PNKP-201ENST00000322344 LAMA1P25391 3075 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 DHHO43323 396 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 DNPH1O43598 174 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 CBR3O75828 277 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 POU3F2P20265 443 aaPredicted RBP19.68■□□□□ 0.74
PNKP-201ENST00000322344 GFOD2Q3B7J2 385 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 FAM209AQ5JX71 171 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 ALKAL2Q6UX46 152 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 RNF144BQ7Z419 303 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 NABP1Q96AH0 204 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 PIGQQ9BRB3 760 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 ZNF224Q9NZL3 707 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 PI4KAP42356 2102 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 C19orf67A6NJJ6 358 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 WDPCPO95876 746 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 ZNF250P15622 560 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 MGMTP16455 207 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 ALDH3B1P43353 468 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 IL13RA1P78552 427 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 ZNF345Q14585 488 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 VAX1Q5SQQ9 334 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 PHYHD1Q5SRE7 291 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 Q6ZSR3 168 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 WBP1Q96G27 269 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 ZNF385AQ96PM9 386 aaKnown RBP19.68■□□□□ 0.74
PNKP-201ENST00000322344 TMA7Q9Y2S6 64 aaKnown RBP19.68■□□□□ 0.74
PNKP-201ENST00000322344 V9GYS6 101 aa19.68■□□□□ 0.74
PNKP-201ENST00000322344 IGKV1-9A0A0C4DH69 117 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 OR2AT4A6NND4 320 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 SOCS1O15524 211 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 ZNF84P51523 738 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 RPS27AP62979 156 aaKnown RBP19.67■□□□□ 0.74
PNKP-201ENST00000322344 UBA52P62987 128 aaKnown RBP19.67■□□□□ 0.74
PNKP-201ENST00000322344 PLAC9Q5JTB6 97 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 ZNF660Q6AZW8 331 aaPredicted RBP19.67■□□□□ 0.74
PNKP-201ENST00000322344 HOGA1Q86XE5 327 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 ARRDC1Q8N5I2 433 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 COQ8AQ8NI60 647 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 C10orf35Q96D05 121 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 SGCZQ96LD1 299 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 JSRP1Q96MG2 331 aaPredicted RBP19.67■□□□□ 0.74
PNKP-201ENST00000322344 OCSTAMPQ9BR26 566 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 PFDN2Q9UHV9 154 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 SESN1Q9Y6P5 492 aa19.67■□□□□ 0.74
PNKP-201ENST00000322344 LOC100509620A0A075B734 347 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 MFSD2BA6NFX1 497 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 CRTAPO75718 401 aaPredicted RBP19.66■□□□□ 0.74
PNKP-201ENST00000322344 DHRS3O75911 302 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 OR2F2O95006 317 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 PMP2P02689 132 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 CD63P08962 238 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 OR2F1Q13607 317 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 C11orf87Q6NUJ2 197 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 MAML2Q8IZL2 1156 aaPredicted RBP19.66■□□□□ 0.74
PNKP-201ENST00000322344 PP6455Q8WZ26 134 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 LYZL4Q96KX0 146 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 SF3B5Q9BWJ5 86 aaKnown RBP19.66■□□□□ 0.74
PNKP-201ENST00000322344 REG4Q9BYZ8 158 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 BANF2Q9H503 90 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 SDHAF2Q9NX18 166 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 SLC39A1Q9NY26 324 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 ZNF230Q9UIE0 474 aaPredicted RBP19.66■□□□□ 0.74
PNKP-201ENST00000322344 FOXD3Q9UJU5 478 aaPredicted RBP19.66■□□□□ 0.74
PNKP-201ENST00000322344 USP34Q70CQ2 3546 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 MFNGO00587 321 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 EFSO43281 561 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 LAMTOR5O43504 91 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 LIPCP11150 499 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 ANOS1P23352 680 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 FAM89BQ8N5H3 189 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 KCNRGQ8N5I3 272 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 OR5M9Q8NGP3 310 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 FBXW5Q969U6 566 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 UCN2Q96RP3 112 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 OR10A2Q9H208 303 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 NARFLQ9H6Q4 476 aa19.66■□□□□ 0.74
PNKP-201ENST00000322344 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.66■□□□□ 0.74
PNKP-201ENST00000322344 IGHV3-15A0A0B4J1V0 119 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 F5H5K5 113 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 DUS4LO95620 317 aaKnown RBP19.65■□□□□ 0.74
PNKP-201ENST00000322344 OTX1P32242 354 aaPredicted RBP19.65■□□□□ 0.74
PNKP-201ENST00000322344 SLC6A9P48067 706 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 TMEM50BP56557 158 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms