RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TMPPEQ6ZT21 453 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PGAP1Q75T13 922 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 ANKRD37Q7Z713 158 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 LHFPL1Q86WI0 220 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 BAP18Q8IXM2 172 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 ZNF101Q8IZC7 436 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 ARMC10Q8N2F6 343 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 GTPBP8Q8N3Z3 284 aaPredicted RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 FAM89BQ8N5H3 189 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 ZSCAN4Q8NAM6 433 aaPredicted RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 CADM4Q8NFZ8 388 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 OR8B12Q8NGG6 310 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 OR10Z1Q8NGY1 313 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 POC1BQ8TC44 478 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 RAB3CQ96E17 227 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SPACA5Q96QH8 159 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PNRC2Q9NPJ4 139 aaKnown RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.7□□□□□ -1.185e-7■□□□□ 10.8
CLK1-201ENST00000321356 ASF1BQ9NVP2 202 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 FOXI3A8MTJ6 420 aaPredicted RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 KCNAB3O43448 404 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 SFT2D2O95562 160 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 MPIG6BO95866 241 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 ACTL6AO96019 429 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 IGHG1P01857 330 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 ADCYAP1P18509 176 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 ANOS1P23352 680 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 PTGDSP41222 190 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 CBX5P45973 191 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 OR3A4PP47883 348 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 ARHGDIBP52566 201 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 EIF3IQ13347 325 aaKnown RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 MFAP5Q13361 173 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 FAM189A2Q15884 450 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 ZNF239Q16600 458 aaKnown RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 HIST3H3Q16695 136 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 NSUN5P2Q63ZY6 315 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 WDR74Q6RFH5 385 aaPredicted RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 DRAM2Q6UX65 266 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 CLEC18BQ6UXF7 455 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 UEVLDQ8IX04 471 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 PUSL1Q8N0Z8 303 aaKnown RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 THAP3Q8WTV1 239 aaPredicted RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 DCUN1D4Q92564 292 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 PMEPA1Q969W9 287 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 NARS2Q96I59 477 aaKnown RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 NUDT22Q9BRQ3 303 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 SOX7Q9BT81 388 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 TMEM59Q9BXS4 323 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 ZNF768Q9H5H4 540 aaKnown RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 GPR84Q9NQS5 396 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 SLC39A1Q9NY26 324 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 ZNF319Q9P2F9 582 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 CARHSP1Q9Y2V2 147 aaKnown RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 KLF2Q9Y5W3 355 aaPredicted RBP7.69□□□□□ -1.18
CLK1-201ENST00000321356 FLVCR1Q9Y5Y0 555 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 RALGAPA1Q6GYQ0 2036 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 VCANP13611 3396 aa7.69□□□□□ -1.18
CLK1-201ENST00000321356 C13orf42A0A1B0GVH6 325 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 GPR31O00270 319 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 FAM157CP0CG43 387 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 RPS2P15880 293 aaKnown RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 GLB1P16278 677 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ALDH3B1P43353 468 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 NPY4RP50391 375 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ZNF41P51814 821 aaPredicted RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 LBX1P52954 281 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ZNF121P58317 390 aaPredicted RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 CLRN1P58418 232 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 GABREP78334 506 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 IL15RAQ13261 267 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 GUCA2BQ16661 112 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 PRSS54Q6PEW0 395 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 CRIP3Q6Q6R5 217 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ABHD12BQ7Z5M8 362 aaPredicted RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 SVBPQ8N300 66 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 OR56B1Q8NGI3 324 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 OR2AJ1Q8NGZ0 328 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 OR13G1Q8NGZ3 307 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 OR6X1Q8NH79 312 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 RHBDD1Q8TEB9 315 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 RNF141Q8WVD5 230 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ROBO4Q8WZ75 1007 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ARL11Q969Q4 196 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 TMEM41AQ96HV5 264 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ARHGAP5-AS1Q96IT6 56 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 AQP10Q96PS8 301 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 TSNAXQ99598 290 aaKnown RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 WDR77Q9BQA1 342 aaPredicted RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 RTBDNQ9BSG5 229 aaPredicted RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 NDRG3Q9UGV2 375 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ATXN7L1Q9ULK2 861 aaPredicted RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 OSGIN2Q9Y236 505 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 PRELID3BQ9Y3B1 194 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 CEP192Q8TEP8 1941 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 IGKV1-9A0A0C4DH69 117 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 TRBV11-1A0A0K0K1C0 115 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 LOC102725191A0A1B0GVB3 256 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 A0A1W2PP11 408 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 MSGN1A6NI15 193 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms