RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ZDBF2Q9HCK1 2354 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 A8MXK9 166 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 EPHA8P29322 1005 aaPredicted RBP15.37■□□□□ 0.05
COL9A1-201ENST00000320755 SERPINF1P36955 418 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 TMEM50BP56557 158 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 RAET1LQ5VY80 246 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 INO80EQ8NBZ0 244 aaPredicted RBP15.37■□□□□ 0.05
COL9A1-201ENST00000320755 OR6X1Q8NH79 312 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 EDAQ92838 391 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 UCN2Q96RP3 112 aa15.37■□□□□ 0.05
COL9A1-201ENST00000320755 RNF222A6NCQ9 220 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 OR5H15A6NDH6 313 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 K7ESF4 209 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 HPP00738 406 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 TMPPEQ6ZT21 453 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 KCNRGQ8N5I3 272 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 SPERTQ8NA61 448 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 OR51T1Q8NGJ9 327 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 KCNG3Q8TAE7 436 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 C19orf25Q9UFG5 118 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-201ENST00000320755 ZNF107Q9UII5 783 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-201ENST00000320755 FAM186AA6NE01 2351 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 IGKV1-9A0A0C4DH69 117 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 LY6G6EA0A0G2JKS1 128 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 FGF2P09038 288 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 LYSMD4Q5XG99 296 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 ZNF160Q9HCG1 818 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 MYOZ1Q9NP98 299 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-201ENST00000320755 SLC2A8Q9NY64 477 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 U3KQA8 63 aa15.36■□□□□ 0.05
COL9A1-201ENST00000320755 CCDC85CA6NKD9 419 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 KRBOX1C9JBD0 128 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 TOX3O15405 576 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 CFIP05156 583 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 UBBP0CG47 229 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 RPS27AP62979 156 aaKnown RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 UBA52P62987 128 aaKnown RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 PHYHD1Q5SRE7 291 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ZNF385CQ66K41 422 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ZNF385AQ96PM9 386 aaKnown RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 PNRC2Q9NPJ4 139 aaKnown RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 TLX3O43711 291 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ADAP1O75689 374 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 DBHP09172 617 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 HIST1H1DP16402 221 aaKnown RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 FAHP16930 419 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 SERPINA2P20848 420 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 HLA-BQ31612 363 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 SLC25A53Q5H9E4 307 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ACOT7LQ6ZUV0 252 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 GALNTL5Q7Z4T8 443 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ZDHHC22Q8N966 263 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 DTWD2Q8NBA8 298 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 TERB2Q8NHR7 220 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ELP5Q8TE02 316 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 MR1Q95460 341 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 CHCHD2Q9Y6H1 151 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 STMND1H3BQB6 276 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 AMY2BP19961 511 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 DEFA5Q01523 94 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 LPCAT3Q6P1A2 487 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ZNF529Q6P280 563 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 ATRAIDQ6UW56 229 aa15.35■□□□□ 0.05
COL9A1-201ENST00000320755 C1orf147Q96MC9 270 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 PTRH2Q9Y3E5 179 aaKnown RBP15.35■□□□□ 0.05
COL9A1-201ENST00000320755 TP53I11O14683 189 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 CHRM2P08172 466 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 CSNK1A1P48729 337 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 AKR1C2P52895 323 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 AKR1C1Q04828 323 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 DTX1Q86Y01 620 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 NAXEQ8NCW5 288 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 PIGTQ969N2 578 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 DUSP23Q9BVJ7 150 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 SHARPINQ9H0F6 387 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 CHMP1AQ9HD42 196 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-201ENST00000320755 WNT16Q9UBV4 365 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 CSAG2Q9Y5P2 127 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 ETV2O00321 342 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-201ENST00000320755 BCL2L11O43521 198 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 OR2F2O95006 317 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 PLATP00750 562 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 CCL3P10147 92 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 PGAM2P15259 253 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 OR3A2P47893 321 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 TAGLNQ01995 201 aaKnown RBP15.34■□□□□ 0.05
COL9A1-201ENST00000320755 OR2F1Q13607 317 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 PGAP1Q75T13 922 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 OR2W3Q7Z3T1 314 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 TMEM185AQ8NFB2 350 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 SLC39A7Q92504 469 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 DCUN1D4Q92564 292 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 MRPS24Q96EL2 167 aaKnown RBP15.34■□□□□ 0.05
COL9A1-201ENST00000320755 ZC3H10Q96K80 434 aaKnown RBP15.34■□□□□ 0.05
COL9A1-201ENST00000320755 FANCFQ9NPI8 374 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 MED9Q9NWA0 146 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 ADAMTS20P59510 1910 aa15.34■□□□□ 0.05
COL9A1-201ENST00000320755 AHCTF1Q8WYP5 2266 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 AQP7P3A6NL99 342 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 MPTX1A8MV57 137 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms