RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 FOXD3Q9UJU5 478 aaPredicted RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 CTSSP25774 331 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 HRH1P35367 487 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 CXADRP78310 365 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 MPPED2Q15777 294 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 SLC23A3Q6PIS1 610 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 ARMC10Q8N2F6 343 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 REG4Q9BYZ8 158 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 NELFAQ9H3P2 528 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 MYO7BQ6PIF6 2116 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 HMSDA8MTL9 139 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 RAD51DO75771 328 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 MPIG6BO95866 241 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 DBHP09172 617 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 CASRP41180 1078 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 TMEM50BP56557 158 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 GRB2P62993 217 aaKnown RBP18.12■□□□□ 0.49
TTC39C-202ENST00000317571 SORDQ00796 357 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 RNASE10Q5GAN6 216 aaKnown RBP18.12■□□□□ 0.49
TTC39C-202ENST00000317571 DOK3Q7L591 496 aa18.12■□□□□ 0.49
TTC39C-202ENST00000317571 hCG_1807616A0A1W2PRN6 198 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 OR2AT4A6NND4 320 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 F5H5K5 113 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 TLX3O43711 291 aaPredicted RBP18.11■□□□□ 0.49
TTC39C-202ENST00000317571 CDC14BO60729 498 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 S100A11P31949 105 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 C11orf88Q6PI97 169 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 TMUB2Q71RG4 321 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 C1QL2Q7Z5L3 287 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 CCDC107Q8WV48 283 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 CXorf58Q96LI9 332 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 NPIPA2E9PIF3 369 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 NPIPA3F8WFD2 350 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 ERCC1P07992 297 aaPredicted RBP18.11■□□□□ 0.49
TTC39C-202ENST00000317571 PPP3CBP16298 524 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 HIST1H3AP68431 136 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 HIST2H3PS2Q5TEC6 136 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 ALKAL2Q6UX46 152 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 HIST2H3AQ71DI3 136 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 PGAP1Q75T13 922 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 TIPARPQ7Z3E1 657 aaKnown RBP18.11■□□□□ 0.49
TTC39C-202ENST00000317571 YRDCQ86U90 279 aaKnown RBP18.11■□□□□ 0.49
TTC39C-202ENST00000317571 TMEM105Q8N8V8 129 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 STEAP2Q8NFT2 490 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 OR5D18Q8NGL1 313 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 RBM24Q9BX46 236 aaKnown RBP18.11■□□□□ 0.49
TTC39C-202ENST00000317571 CST11Q9H112 138 aa18.11■□□□□ 0.49
TTC39C-202ENST00000317571 DHHO43323 396 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 HCKP08631 526 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 RFPL3SP0C7P2 107 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 MPZP25189 248 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 MEF2DQ14814 521 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 NPRL2Q8WTW4 380 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 FBXO17Q96EF6 278 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 PGAM5Q96HS1 289 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 TMEM41AQ96HV5 264 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 DISC1C4P0D8 188 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 EIF1BO60739 113 aaKnown RBP18.1■□□□□ 0.49
TTC39C-202ENST00000317571 STK17BO94768 372 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 ZBTB25P24278 435 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 OTX2P32243 289 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 RAC1P63000 192 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 GALNT11Q8NCW6 608 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 SDHAF2Q9NX18 166 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 KCNMB2Q9Y691 235 aa18.1■□□□□ 0.49
TTC39C-202ENST00000317571 POM121CA8CG34 1229 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 CCSO14618 274 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 CBR3O75828 277 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 NMBP08949 121 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 PPP1R1AQ13522 171 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 OR2W3Q7Z3T1 314 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 COQ8AQ8NI60 647 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 NUDT16L1Q9BRJ7 211 aaKnown RBP18.09■□□□□ 0.49
TTC39C-202ENST00000317571 ARL6Q9H0F7 186 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 RP2O75695 350 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 HLA-AP01891 365 aaKnown RBP18.09■□□□□ 0.49
TTC39C-202ENST00000317571 PMP2P02689 132 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 OTX1P32242 354 aaPredicted RBP18.09■□□□□ 0.49
TTC39C-202ENST00000317571 SUCLG1P53597 346 aaKnown RBP18.09■□□□□ 0.49
TTC39C-202ENST00000317571 UBE2V2Q15819 145 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 LIN54Q6MZP7 749 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 RGS7BPQ6MZT1 257 aaPredicted RBP18.09■□□□□ 0.49
TTC39C-202ENST00000317571 GGNQ86UU5 652 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 SLC25A42Q86VD7 318 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 ADAD2Q8NCV1 583 aaKnown RBP18.09■□□□□ 0.49
TTC39C-202ENST00000317571 GJC3Q8NFK1 279 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 OR5M8Q8NGP6 311 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 PRRT1Q99946 306 aa18.09■□□□□ 0.49
TTC39C-202ENST00000317571 MFSD2BA6NFX1 497 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 LRRC3CA6NJW4 275 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 B3GALNT1O75752 331 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 VAMP5O95183 116 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 FAHP16930 419 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 SLC6A9P48067 706 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 GSK3AP49840 483 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 RIPPLY1Q0D2K3 151 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 BEST3Q8N1M1 668 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 LINC00052Q96N35 136 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 TMEM59Q9BXS4 323 aa18.08■□□□□ 0.49
TTC39C-202ENST00000317571 IFT46Q9NQC8 304 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms