RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 GGTLC2Q14390 218 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 VAX1Q5SQQ9 334 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 TMEM179BQ7Z7N9 219 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MRGPREQ86SM8 312 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 OR10D4PQ8NGN7 298 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MS4A10Q96PG2 267 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF2Q9BSG1 426 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 NKX2-4Q9H2Z4 354 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 GPR160Q9UJ42 338 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 KCNE5Q9UJ90 142 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF840PA6NDX5 716 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 TLCD2A6NGC4 264 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MEIS3P2A8K0S8 358 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 RRP8O43159 456 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 GALR3O60755 368 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 NQO2P16083 231 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 FCGR2CP31995 323 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 OR3A1P47881 315 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 SLC11A1P49279 550 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 YBX1P67809 324 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 DPTQ07507 201 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF124Q15973 351 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 EXT1Q16394 746 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PIP5KL1Q5T9C9 394 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 LEMD1Q68G75 181 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 RPL7L1Q6DKI1 246 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 OR5M10Q6IEU7 315 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 TMEM184AQ6ZMB5 413 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 NLGN4YQ8NFZ3 816 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 OR5B3Q8NH48 314 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ZMYND19Q96E35 227 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 DERL3Q96Q80 235 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 IKZF5Q9H5V7 419 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF552Q9H707 407 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 B4GALT6Q9UBX8 382 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF230Q9UIE0 474 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 IER3IP1Q9Y5U9 82 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 CSMD1Q96PZ7 3565 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 IGLV3-16A0A075B6K0 115 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF724A8MTY0 619 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 NDUFS8O00217 210 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ADAP1O75689 374 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 VENTXO95231 258 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 CBX7O95931 251 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MPZP25189 248 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 GABRA3P34903 492 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 CD200P41217 278 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 SUMO3P55854 103 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 CTXN1P60606 82 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 IFITM3Q01628 133 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PLP2Q04941 152 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 SHHQ15465 462 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 VAMP3Q15836 100 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MFSD12Q6NUT3 480 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 GPRIN1Q7Z2K8 1008 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ERASQ7Z444 233 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 RNF175Q8N4F7 328 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 IMMP2LQ96T52 175 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 TRMT61BQ9BVS5 477 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 GAB2Q9UQC2 676 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PLRG1O43660 514 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 CA11O75493 328 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 WISP3O95389 354 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 LCATP04180 440 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 SLC35E2P0CK97 266 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 FABP4P15090 132 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 FSTP19883 344 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MPGP29372 298 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 HOXA11P31270 313 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 VASPP50552 380 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 HLA-DRB3P79483 266 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 SLC14A1Q13336 389 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MRPL2Q5T653 305 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MRGPRGQ86SM5 289 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 TMEM183AQ8IXX5 376 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 OR51Q1Q8NH59 317 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PHOSPHO1Q8TCT1 267 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MBD3L1Q8WWY6 194 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 NPDC1Q9NQX5 325 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 GSN-AS1Q9NRJ2 163 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 TDP1Q9NUW8 608 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 CDC42EP3Q9UKI2 254 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MMACHCQ9Y4U1 282 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PCDHGA9Q9Y5G4 932 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 SLC5A10A0PJK1 596 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 SIRPB1O00241 398 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 CTAG2O75638 210 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 OR4Q2P0C623 313 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 C6P13671 934 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ATF1P18846 271 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 OMGP23515 440 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PTGFRP43088 359 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PCP4P48539 62 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PTTG1IPP53801 180 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ACTR1AP61163 376 aa4.09□□□□□ -1.75
CNOT1-201ENST00000317147 PRDX1Q06830 199 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.09□□□□□ -1.75
CNOT1-201ENST00000317147 MAML2Q8IZL2 1156 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms