RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 OR52N4Q8NGI2 321 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 AQP3Q92482 292 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 ADAT3Q96EY9 351 aaPredicted RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 OPN4Q9UHM6 478 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 RHBDD3Q9Y3P4 386 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 AUP1Q9Y679 476 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 KCNMB2Q9Y691 235 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 LAMA5O15230 3695 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 ANKRD11Q6UB99 2663 aaPredicted RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 TMEM235A6NFC5 223 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 LRRC3CA6NJW4 275 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 MCRIP1C9JLW8 97 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 M0QYG6 137 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 QDPRP09417 244 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 ZNF35P13682 527 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 CNR1P21554 472 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 GSK3AP49840 483 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 TMPRSS3P57727 454 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 SEC61A1P61619 476 aaKnown RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 POU4F3Q15319 338 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 MOGAT2Q3SYC2 334 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 ZNF260Q3ZCT1 412 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 C3P1Q6ZMU1 363 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 TMPPEQ6ZT21 453 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 PGAP1Q75T13 922 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 COMMD2Q86X83 199 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 CHST4Q8NCG5 386 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 OR51E1Q8TCB6 317 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 JSRP1Q96MG2 331 aaPredicted RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 SIGLEC12Q96PQ1 595 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 NUDT16L1Q9BRJ7 211 aaKnown RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 FBLN5Q9UBX5 448 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 LOC400499M0QZD8 3231 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 H3BUI4 141 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 OR4E1P0C645 316 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 CXCL2P19875 107 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 CDAP32320 146 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 CCL11P51671 97 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 UCNP55089 124 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 GRB2P62993 217 aaKnown RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 FOXO1Q12778 655 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 ZMYND11Q15326 602 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 OR1C1Q15619 314 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 HIST3H3Q16695 136 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 CDNFQ49AH0 187 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 ZNF529Q6P280 563 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 FJX1Q86VR8 437 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 C12orf45Q8N5I9 185 aaPredicted RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 OR13C9Q8NGT0 318 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 SFXN2Q96NB2 322 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 PRRT1Q99946 306 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 TINAGL1Q9GZM7 467 aaPredicted RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 CHST6Q9GZX3 395 aa12.49□□□□□ -0.41
VRK3-201ENST00000316763 ZMAT3Q9HA38 289 aaKnown RBP12.49□□□□□ -0.41
VRK3-201ENST00000316763 PTPRQQ9UMZ3 2332 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 EML6Q6ZMW3 1958 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 A0A1B0GTI1 187 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 OR6C65A6NJZ3 312 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 RAB27BO00194 218 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 SIX6O95475 246 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 F10P00742 488 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 ZNF17P17021 662 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 SRD5A2P31213 254 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 ZNF93P35789 620 aaPredicted RBP12.48□□□□□ -0.41
VRK3-201ENST00000316763 PRKXP51817 358 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 H2BFSP57053 126 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 FAM189A2Q15884 450 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 RNASE10Q5GAN6 216 aaKnown RBP12.48□□□□□ -0.41
VRK3-201ENST00000316763 CLVS2Q5SYC1 327 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 AWAT2Q6E213 333 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 LINC00696Q6ZRV3 163 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 TRAPPC6BQ86SZ2 158 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 GSX2Q9BZM3 304 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
VRK3-201ENST00000316763 MRPS18CQ9Y3D5 142 aaKnown RBP12.48□□□□□ -0.41
VRK3-201ENST00000316763 ZNF814B7Z6K7 855 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 ZNF735P0CB33 412 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 S100A11P31949 105 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 CLDN17P56750 224 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 QRFPP83859 136 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 SCGB2B2Q4G0G5 96 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 OR2W3Q7Z3T1 314 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 ABHD12BQ7Z5M8 362 aaPredicted RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 ANGPTL5Q86XS5 388 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 PAQR4Q8N4S7 273 aaPredicted RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 ZNF283Q8N7M2 679 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 MDS2Q8NDY4 140 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 FAM173AQ9BQD7 235 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 NAA11Q9BSU3 229 aaPredicted RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 SLC2A8Q9NY64 477 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms