RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TMEM52Q8NDY8 209 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ST7LQ8TDW4 575 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 BTF3L4Q96K17 158 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 IP6K3Q96PC2 410 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 GINS3Q9BRX5 216 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 HIPK2Q9H2X6 1198 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 CNTD2Q9H8S5 307 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SDHAF3Q9NRP4 125 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 DKKL1Q9UK85 242 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NPIPA1Q9UND3 350 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 POLR1DQ9Y2S0 133 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 UBE2KP61086 200 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 RPS23P62266 143 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 UBE2V2Q15819 145 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FAM89BQ8N5H3 189 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 OR8U1Q8NH10 309 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 OR14C36Q8NHC7 312 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FAM3CQ92520 227 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 WNT2BQ93097 391 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SLC25A36Q96CQ1 311 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 POM121Q96HA1 1249 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NOL4LQ96MY1 436 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 C19orf12Q9NSK7 152 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 MRPL22Q9NWU5 206 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 MRPS2Q9Y399 296 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 OR5H15A6NDH6 313 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 OR5H1A6NKK0 313 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 IGHMP01871 453 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 HEXBP07686 556 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SFTPDP35247 375 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 QRFPP83859 136 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 HIKESHIQ53FT3 197 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NPSR1Q6W5P4 371 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 HEPN1Q6WQI6 88 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 COX15Q7KZN9 410 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SLC26A10Q8NG04 563 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FGGYQ96C11 551 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 OR10C1Q96KK4 312 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 GPER1Q99527 375 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SLC25A31Q9H0C2 315 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 TUBD1Q9UJT1 453 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 MYO16Q9Y6X6 1858 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PP55 124 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ALG1L2C9J202 215 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 H7C1Q1 480 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 CLDN34H7C241 214 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 RRP8O43159 456 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 DEDDO75618 318 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 CDS2O95674 445 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 POLR2HP52434 150 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SPCS3P61009 180 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 YPEL5P62699 121 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 UNC119Q13432 240 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 PYY3Q5JQD4 70 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FNDC7Q5VTL7 733 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SLC35E3Q7Z769 313 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF519Q8TB69 540 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 DOK4Q8TEW6 326 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 DECR2Q9NUI1 292 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 EHFQ9NZC4 300 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 TBX21Q9UL17 535 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 AMDHD2Q9Y303 409 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PPE2 198 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 P2RY10O00398 339 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NPIPB7O75200 414 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NUDT14O95848 222 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 PMP2P02689 132 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 HSPB1P04792 205 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 KCNAB1Q14722 419 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF124Q15973 351 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 PRTGQ2VWP7 1150 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ABCA11PQ4W5N1 156 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FBXW12Q6X9E4 464 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 DOK3Q7L591 496 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 GVQW1Q8N7I0 195 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 C19orf47Q8N9M1 422 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ADAD2Q8NCV1 583 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 BEND2Q8NDZ0 799 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 OR10G4Q8NGN3 311 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 OR14L1PQ8NHC6 308 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FLVCR1-AS1Q8TAF5 88 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ARSGQ96EG1 525 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 A0A087WV48 116 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 hCG_1809904A0A1W2PP81 198 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PR64 198 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PRV1 198 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 SOX1O00570 391 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 UTS2O95399 124 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ALDH3B1P43353 468 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 CSNK1A1P48729 337 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NDUFA6P56556 154 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF674Q2M3X9 581 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FAM185AQ8N0U4 392 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 C1orf87Q8N0U7 546 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 HSD17B11Q8NBQ5 300 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 TAAR8Q969N4 342 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ISOC2Q96AB3 205 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 KCNK15Q9H427 330 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM242Q9NWH2 141 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 PUS1Q9Y606 427 aaKnown RBP eCLIP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms