RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 FBXO8Q9NRD0 319 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 TAS2R5Q9NYW4 299 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ADH4P08319 380 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ERHP84090 104 aaKnown RBP12.09□□□□□ -0.47
RFFL-201ENST00000315249 OSR2Q8N2R0 312 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 POFUT1Q9H488 388 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 RALGAPA1Q6GYQ0 2036 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 TRDV1A0A1B0GX56 115 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ANGPTL7O43827 346 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ZNF205O95201 554 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 FUT6P51993 359 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 GNG3P63215 75 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ZNF425Q6IV72 752 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 RAB1CQ92928 201 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ZNF251Q9BRH9 671 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 LRP5LA4QPB2 252 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 LIFP15018 202 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 COMMD5Q9GZQ3 224 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 DNAJB12Q9NXW2 375 aaKnown RBP12.09□□□□□ -0.47
RFFL-201ENST00000315249 WNT1P04628 370 aa12.08□□□□□ -0.47
RFFL-201ENST00000315249 THNSL2Q86YJ6 484 aa12.08□□□□□ -0.47
RFFL-201ENST00000315249 ABHD3Q8WU67 409 aa12.08□□□□□ -0.47
RFFL-201ENST00000315249 ZNF2Q9BSG1 426 aaPredicted RBP12.08□□□□□ -0.47
RFFL-201ENST00000315249 LRP12Q9Y561 859 aa12.08□□□□□ -0.47
RFFL-201ENST00000315249 M0QZ24 198 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 TGM6O95932 706 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 SEMG1P04279 462 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 SP1P08047 785 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 FAM26EQ8N5C1 309 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 OR10V1Q8NGI7 309 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 OR6S1Q8NH40 331 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 SLC35E1Q96K37 410 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 HRH4Q9H3N8 390 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 UCK1Q9HA47 277 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 LNP1A1A4G5 178 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 HSPB2A8KAH6 182 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 CLN5O75503 358 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 HSPB2Q16082 182 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 OR10K2Q6IF99 312 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 HMGCLL1Q8TB92 370 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 FCARP24071 287 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 CASP3P42574 277 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 RAC3P60763 192 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 TOMM34Q15785 309 aaPredicted RBP12.08□□□□□ -0.48
RFFL-201ENST00000315249 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 C17orf50Q8WW18 174 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 CMBLQ96DG6 245 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 B4E171 279 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 RPS2P15880 293 aaKnown RBP12.08□□□□□ -0.48
RFFL-201ENST00000315249 TSPAN7P41732 249 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 ALDH3B1P43353 468 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 HNRNPFP52597 415 aaKnown RBP12.08□□□□□ -0.48
RFFL-201ENST00000315249 PIK3IP1Q96FE7 263 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 A0A0B4J2A0 478 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 F8W036 122 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 SULT1B1O43704 296 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 ECI1P42126 302 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 BLOC1S1P78537 153 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 DEDD2Q8WXF8 326 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 SHPKQ9UHJ6 478 aa12.08□□□□□ -0.48
RFFL-201ENST00000315249 DICER1Q9UPY3 1922 aaKnown RBP12.07□□□□□ -0.48
RFFL-201ENST00000315249 RAF1P04049 648 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 GAB4Q2WGN9 574 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 LRFN5Q96NI6 719 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 PLA2G12AQ9BZM1 189 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 SLC39A9Q9NUM3 307 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 SH2D7A6NKC9 451 aaPredicted RBP12.07□□□□□ -0.48
RFFL-201ENST00000315249 TMPRSS2O15393 492 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 RAB4AP20338 218 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 CCR6P51684 374 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 OR2G2Q8NGZ5 317 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 TMEM171Q8WVE6 324 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 TMEM235A6NFC5 223 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 SULT1C4O75897 302 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 FABP1P07148 127 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 PRSS12P56730 875 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 SLC35A2P78381 396 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 ZIC1Q15915 447 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 TATDN3Q17R31 274 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 SPNS3Q6ZMD2 512 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 SIAH3Q8IW03 269 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 FBXL2Q9UKC9 423 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 MASP2O00187 686 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 Q6ZRG5 221 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 RPEQ96AT9 228 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 A0A0B4J2E0 115 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 A0A1B0GX12 115 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 SCAF4O95104 1147 aaKnown RBP12.07□□□□□ -0.48
RFFL-201ENST00000315249 OR10A3P58181 314 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 HABP2Q14520 560 aaPredicted RBP12.07□□□□□ -0.48
RFFL-201ENST00000315249 IAH1Q2TAA2 248 aaPredicted RBP12.07□□□□□ -0.48
RFFL-201ENST00000315249 GLRX2Q9NS18 164 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 GPATCH2Q9NW75 528 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms